Clone Read LE_HBa0052F03_SP6_81268

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0052F03_SP6_81268
Primer
SP6
ID from Seq. Facility
LE_HBa_052_F03-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
321 trimmed for vector and quality, 815 raw
Sequence
>LE_HBa0052F03_SP6_81268 (raw untrimmed)
GGCGTGTTACTGTCTAATGTCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGNNNNNNNNNNNNNGNNANNCCCNTTGNNACCNNCNNNCNNNN
CNCNNACCCCCNCCCCNANACCTTTC
TTACTCCTTATTAATGGTGATAGAGGCATTTGTAAGGGTTGCAAGGTTATTCTATGTTAGAATTGTACTACTCA
CACAAGTTTTTGATAATGGATTGGAGATTAAGAGGGATAAAAAGATTTTGTATAAACAATCGAGGATTAAATCAGGTGGCTTAACCTTTACCTTTTCTTG
AGAGATGGGGAGAAGTTGATTGGTATGGGGCCTGGAGTAGTAGCTGGGATGTGAACAACATGGGGGTTGGGGGATAACATAGCTAGTTGCATTGGGGAAG
CATCTATAAATGTGCTAGGATATCGAGGGGAACTTTGATGGTCATCAAGGAGATAAGTGGCGGAACGGAAAAGTTCTTTTTTATTTCAAACCAAAGAAGG
TTGCATATACAAAGTTGATGAAATGCGTGGACGATGATCACAAGTGTACACTTCAACAAAGTGTCAAAGATATATGCTGAAATTCAATGTGCTACTTCGC
AAACTAGAACACTACAATCGCTTCGTGGGGTGTAGTCAACGAACCCCAGGACTGAAAAGAAATTCTACACTTTGCTTGTCTAAACATTGAAAAAGCTTGC
GAAATAGATCACCTTAAATGTTTCAAGGATAAATTTCGGAGGGCCTTAGTAAATAGAAACTTTCCCTTCGCAATTGTTAAAAAGGCTTATTCTCCAAAAT
TTTCATATTAATATC
>LE_HBa0052F03_SP6_81268 (trimmed for quality and cloning vector)
TTACTCCTTATTAATGGTGATAGAGGCATTTGTAAGGGTTGCAAGGTTATTCTATGTTAGAATTGTACTACTCACACAAGTTTTTGATAATGGATTGGAG
ATTAAGAGGGATAAAAAGATTTTGTATAAACAATCGAGGATTAAATCAGGTGGCTTAACCTTTACCTTTTCTTGAGAGATGGGGAGAAGTTGATTGGTAT
GGGGCCTGGAGTAGTAGCTGGGATGTGAACAACATGGGGGTTGGGGGATAACATAGCTAGTTGCATTGGGGAAGCATCTATAAATGTGCTAGGATATCGA
GGGGAACTTTGATGGTCATCA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.935358
Expected error %
0.459775
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0052F03
Clone
Clone name
hba-52f3
LE_HBa0052F03
P052F03
Clone type
BAC
Contamination
none
Estimated length
98,980
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found