Clone Read LE_HBa0055F06_SP6_82042

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0055F06_SP6_82042
Primer
SP6
ID from Seq. Facility
LE_HBa_055_F06-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
647 trimmed for vector and quality, 806 raw
Sequence
>LE_HBa0055F06_SP6_82042 (raw untrimmed)
TACTTTGGAAATTCGACTTTTGAATTAGGCCACGGACCCTGTGGACATCAAATTTGTAGAGCTTGAAGTTCCTTTAAAGGAAAGTGGACTTAATGCTAGA
AAATACCACAGGTCCTTGTAATACCCATAAAAAGTGAAACATGACATCTTCTGGACATGTTGAATGTTGTAGGATGGATAATACTGCTTTCCATAGAACC
TATATATACGAGACATAAGTAATTATATAATAACGTACTCACAAAATATTATGCCCTACGGCATAAAGAATCTCAAGTTCAAATATATTTACATGTTTTG
AGTACATATGAAAATGAAAGATATTTTATAAGTTATATACACGGATAACAAAAAAAAATATCGCTCAAATATAATTAGCAATGAATGACTATTGTCAGTT
TGTCGTTAAACAACAAAAATCCACCACTTATATTGTTTTATTACTATGAATTATCAAAAAATCATATTAATTTTTTTTTTTTTTTAATGACAGATTAGCA
ACGAATCGTATAGCTAGCTCCGGGTCTCTTTTTTGGTAGTGCGCGCTAGTGACCTATTAAGTAGGCCCACACATGGAAGACATTTAGACATACAATATTT
TAAAGTAACTAAAATGTACTAATTTCAAAGTTTTTTAATTGTGATGGTCATACATTTCAACAACAATACCTCTCAAATAATTAGCATCAAGAAGTCATGG
CCACATGAATACGGTCCTCGGCGGACAAACCCACAATCCCTCCCATTGCAAAAAGCAGGCGCTTCCCAAAAAACGGAAACATGTAAGTAAAGTTGGTTTC
AAGAAA
>LE_HBa0055F06_SP6_82042 (trimmed for quality and cloning vector)
AGGCCACGGACCCTGTGGACATCAAATTTGTAGAGCTTGAAGTTCCTTTAAAGGAAAGTGGACTTAATGCTAGAAAATACCACAGGTCCTTGTAATACCC
ATAAAAAGTGAAACATGACATCTTCTGGACATGTTGAATGTTGTAGGATGGATAATACTGCTTTCCATAGAACCTATATATACGAGACATAAGTAATTAT
ATAATAACGTACTCACAAAATATTATGCCCTACGGCATAAAGAATCTCAAGTTCAAATATATTTACATGTTTTGAGTACATATGAAAATGAAAGATATTT
TATAAGTTATATACACGGATAACAAAAAAAAATATCGCTCAAATATAATTAGCAATGAATGACTATTGTCAGTTTGTCGTTAAACAACAAAAATCCACCA
CTTATATTGTTTTATTACTATGAATTATCAAAAAATCATATTAATTTTTTTTTTTTTTTAATGACAGATTAGCAACGAATCGTATAGCTAGCTCCGGGTC
TCTTTTTTGGTAGTGCGCGCTAGTGACCTATTAAGTAGGCCCACACATGGAAGACATTTAGACATACAATATTTTAAAGTAACTAAAATGTACTAATTTC
AAAGTTTTTTAATTGTGATGGTCATACATTTCAACAACAATACCTCT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.938977
Expected error %
0.982468
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0055F06
Clone
Clone name
hba-55f6
LE_HBa0055F06
C06HBa0055F06
P055F06
Clone type
BAC
Contamination
none
Estimated length
111,724
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found