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Clone Read LE_HBa0055P11_SP6_82532

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0055P11_SP6_82532
Primer
SP6
ID from Seq. Facility
LE_HBa_055_P11-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
672 trimmed for vector and quality, 778 raw
Sequence
>LE_HBa0055P11_SP6_82532 (raw untrimmed)
CTACTAGCACTTGATCTTCTTTTAGGTTTTCATAGAGGTTTTTGAGATATGAGTTTTGGAGAAACTTTGGCGGTAAAGTTAGTTATGATTTGGGGTGTTG
ACTTGTTGTGAATTAAAGGATTAATTTAAGGGTCCTATTAACTATTTATAGGAGGTTATTTGACCACTTAACCAATCCCCTCAGCCCCCAATTAATTAGG
TAACTTGATTCCCAAACCCCAACTTAAAACTAAACTTACCAAAGGCACCATTTATGGATCCCCATCTATGGACCGTAGATTGATATATTGTCCATGGTTT
AGTCTCATGCCTTGGGGATTCATAGTGCTTCACTATTTTGGGTATAACTTTTACTCTGAAATTGGAATTAGGCGAACTCGGTGGTGTTCGAAAGAGGACT
CATAAATCTTTAATTGTATAGGTAATGGACATCTTAATTCATTTTGAGCTATGAGATATGAACATTTGAATTTTCTCCTCACTTACCTTGACCAACTTCT
TGATAGCATTGCAACCCTCGACTCACTCCACCACTCGTGGACCATGATTCCACTCACAGACCGTCCTGGGAGTCCGTGGTTTCGGGCCGTGGCTTGCAAT
TGAAGACCAATCCTTCCTACGCTAAGTCATAACCCACGCTCATGACTTACGGGGCGTGATATCCCTCTGTGAACCAAGTTGTTTTTTACAGCTTTAGGGC
AGTGTTGGGGGTCTCCTTTATGGACTTTTTTTGATTGTTTTTATAGTTAGTTTAATATGTTTATTTTAACCTACGCCC
>LE_HBa0055P11_SP6_82532 (trimmed for quality and cloning vector)
TGATCTTCTTTTAGGTTTTCATAGAGGTTTTTGAGATATGAGTTTTGGAGAAACTTTGGCGGTAAAGTTAGTTATGATTTGGGGTGTTGACTTGTTGTGA
ATTAAAGGATTAATTTAAGGGTCCTATTAACTATTTATAGGAGGTTATTTGACCACTTAACCAATCCCCTCAGCCCCCAATTAATTAGGTAACTTGATTC
CCAAACCCCAACTTAAAACTAAACTTACCAAAGGCACCATTTATGGATCCCCATCTATGGACCGTAGATTGATATATTGTCCATGGTTTAGTCTCATGCC
TTGGGGATTCATAGTGCTTCACTATTTTGGGTATAACTTTTACTCTGAAATTGGAATTAGGCGAACTCGGTGGTGTTCGAAAGAGGACTCATAAATCTTT
AATTGTATAGGTAATGGACATCTTAATTCATTTTGAGCTATGAGATATGAACATTTGAATTTTCTCCTCACTTACCTTGACCAACTTCTTGATAGCATTG
CAACCCTCGACTCACTCCACCACTCGTGGACCATGATTCCACTCACAGACCGTCCTGGGAGTCCGTGGTTTCGGGCCGTGGCTTGCAATTGAAGACCAAT
CCTTCCTACGCTAAGTCATAACCCACGCTCATGACTTACGGGGCGTGATATCCCTCTGTGAACCAAGTTGTT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.967339
Expected error %
0.590602
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0055P11
Clone
Clone name
hba-55p11
LE_HBa0055P11
C03HBa0055P11
P055P11
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found