Clone Read LE_HBa0040I23_SP6_8492

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0040I23_SP6_8492
Primer
SP6
ID from Seq. Facility
LE_HBa_040_I23-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
737 trimmed for vector and quality, 837 raw
Genbank Accession
Sequence
>LE_HBa0040I23_SP6_8492 (raw untrimmed)
AAAACGGGGTTCCGCCTTTCTATGTATNGTNCGNANNGAGTACTTCCTCCATTTGCTGTATTTGTCATTTATTTCTAAAATAAATTTTCATTTTTATTTG
TCACTTATAACATATCAAGAAATAATAATTCTTTTTTCCATTCACCCCGACCTTAACTACTTGTACACTATCGATTTTATACATTTTTTAAAAAACTGCA
AATAAAAGTATAATTTTACTACTATCACCATTTGAATATAATAAATATAATATCTTGACAAATATAATTAAAAATAACAATAATTAATTAATAAAAAATA
AATTAAAAGATAAATGTAAAGTTATTTATCAGAAATAGAGAGAATATAATATACAAATAAGAAAAAGAAGAATATATATTTAATGAATAAAAAAAATGTA
TTCCCCACTTATGGTGTCATGGAGTTTCCACAACACTGACAAACAGATAGGATGAGTGTGTGAGAAAGAGGGGTAAAGGGCTGAATTAACCATTGAATAT
TTCCAGAGAAAAAAAAATAGTCTTCTTTTCCCGAAAAACTGTAACTAACTTAACAGAGACCTCCATAAATTCAAATTACTCTTACCAATGTTGCCACTAG
TATTTCATATTCATTAATTTTACATATTTTTAAAAAAAATTATAAATAAAAAGATAATTTTATTATATCACTTTTTACAAATATAAACATAATAACTATA
AAATTTCATGAAGTAAACAAATATCATCGAACAAACTCCAAATAGTGTAGTGAATAACTATTATTGAACAGAGTGAATACTTGATTTTTGTTAATTTGTA
ACTTAGTTCGCTTTAAAAAAGTAACCCTAATTTGAAT
>LE_HBa0040I23_SP6_8492 (trimmed for quality and cloning vector)
GTACTTCCTCCATTTGCTGTATTTGTCATTTATTTCTAAAATAAATTTTCATTTTTATTTGTCACTTATAACATATCAAGAAATAATAATTCTTTTTTCC
ATTCACCCCGACCTTAACTACTTGTACACTATCGATTTTATACATTTTTTAAAAAACTGCAAATAAAAGTATAATTTTACTACTATCACCATTTGAATAT
AATAAATATAATATCTTGACAAATATAATTAAAAATAACAATAATTAATTAATAAAAAATAAATTAAAAGATAAATGTAAAGTTATTTATCAGAAATAGA
GAGAATATAATATACAAATAAGAAAAAGAAGAATATATATTTAATGAATAAAAAAAATGTATTCCCCACTTATGGTGTCATGGAGTTTCCACAACACTGA
CAAACAGATAGGATGAGTGTGTGAGAAAGAGGGGTAAAGGGCTGAATTAACCATTGAATATTTCCAGAGAAAAAAAAATAGTCTTCTTTTCCCGAAAAAC
TGTAACTAACTTAACAGAGACCTCCATAAATTCAAATTACTCTTACCAATGTTGCCACTAGTATTTCATATTCATTAATTTTACATATTTTTAAAAAAAA
TTATAAATAAAAAGATAATTTTATTATATCACTTTTTACAAATATAAACATAATAACTATAAAATTTCATGAAGTAAACAAATATCATCGAACAAACTCC
AAATAGTGTAGTGAATAACTATTATTGAACAGAGTGA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.876449
Expected error %
0.0648095
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0040I23
Clone
Clone name
hba-40i23
LE_HBa0040I23
C01HBa0040I23
P040I23
Clone type
BAC
Contamination
none
Estimated length
107,275
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found