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Clone Read LE_HBa0093F09_SP6_85888

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0093F09_SP6_85888
Primer
SP6
ID from Seq. Facility
LE_HBa_093_F09-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
646 trimmed for vector and quality, 954 raw
Sequence
>LE_HBa0093F09_SP6_85888 (raw untrimmed)
CCCGGGTTATATTTTTTTTACCTTTATTTCCACTGGGCGTATGTTTTCACAAAGAAGTTTATGCTCAAGGTCGGTAAATATATATACTTCCGTCGTTCAT
TTTATTTTAACCTAATTTTATTTTCTCATCCATTTTCAAAAGAATAATTTTTTTCTCTTTTTAGGAATCTCTGCATTTTAAATTTTCACGTGGCACGTTT
AGGACCACAAGATTTAATGATATTTTCATATATTTGACATATTTTTACTTTAAGTAGACTGAATTTTTTCCTCGTCATTTAAAAAATTGTGACATTTTTT
TTTGGATTAAACAAAAAGAAAATGGTGCCACATAAAATGAGACGGGGGAGTAAATTGTAAAATGTAAATAGTTATTTTTTTCAATTAACATAAAATAATA
TTGAGATAAGTGTCAAAAACACGCCTAAACTATACTTTTTTTTAGTTTAAACTATTGAGAGTGTAAGTTTCGTACTTACACTATAACTTTTTAGTTTGAA
AAATACATCTCTCTTTTATACCACTTTCAACATGGTGTGTGTAATAGCATTCTCTCTTTCATTTTAAAAATTATCACATTACACTCCACATGGACAAAAT
ATTTCAACCTCAAAAGTTAAATAAATTATTGGTATTAGTTAAAGAAATAATTCTATCAACTCCATCTAAACCTCCGCTTTCAATTTTTCTCTTATTTAGC
ATTAAATATATATCCATATTAAAAATATTTTTTACTTGCAGCCGCAAATTTTTTTATTTACTTATGCTATATCCGTCACCTGCAAAAAAAATTTCCCAAA
AAATATATGTAGTACGTTTCTAAACAAAAAGATAAGTATAAAAAATAAAAATTAAGGTTAGGGAAAAAATCAAAGGAATAACTTGGGGGGGGGGCACTCT
CTTTTTCAGCCCACTCTATAACCCTACACCTAATCACTCTAAATCAACTTATCC
>LE_HBa0093F09_SP6_85888 (trimmed for quality and cloning vector)
CGTATGTTTTCACAAAGAAGTTTATGCTCAAGGTCGGTAAATATATATACTTCCGTCGTTCATTTTATTTTAACCTAATTTTATTTTCTCATCCATTTTC
AAAAGAATAATTTTTTTCTCTTTTTAGGAATCTCTGCATTTTAAATTTTCACGTGGCACGTTTAGGACCACAAGATTTAATGATATTTTCATATATTTGA
CATATTTTTACTTTAAGTAGACTGAATTTTTTCCTCGTCATTTAAAAAATTGTGACATTTTTTTTTGGATTAAACAAAAAGAAAATGGTGCCACATAAAA
TGAGACGGGGGAGTAAATTGTAAAATGTAAATAGTTATTTTTTTCAATTAACATAAAATAATATTGAGATAAGTGTCAAAAACACGCCTAAACTATACTT
TTTTTTAGTTTAAACTATTGAGAGTGTAAGTTTCGTACTTACACTATAACTTTTTAGTTTGAAAAATACATCTCTCTTTTATACCACTTTCAACATGGTG
TGTGTAATAGCATTCTCTCTTTCATTTTAAAAATTATCACATTACACTCCACATGGACAAAATATTTCAACCTCAAAAGTTAAATAAATTATTGGTATTA
GTTAAAGAAATAATTCTATCAACTCCATCTAAACCTCCGCTTTCAA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.900861
Expected error %
0.0909894
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0093F09
Clone
Clone name
hba-93f9
LE_HBa0093F09
C08HBa0093F09
P093F09
Clone type
BAC
Contamination
none
Estimated length
90,012
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found