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Clone Read LE_HBa0040L19_SP6_8628

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0040L19_SP6_8628
Primer
SP6
ID from Seq. Facility
LE_HBa_040_L19-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
611 trimmed for vector and quality, 804 raw
Genbank Accession
DU027815
Sequence
>LE_HBa0040L19_SP6_8628 (raw untrimmed)
TTCCCTTAGGTTTCCCTACTTTCCACTGCAGATTACCCTTGTGTTTTGTCCTCCGGACACTTGTTATGTTGCATCAAAGCTCTCATTCGGACTTCATATA
TTAGTTCCTGATCCCTTTACTCCAAATGCTATTCATCTCTATTTTCTAAGTCAACCCTCCCTGCAACTCTAGCTAAGACTACAACCTTAGGTTCTAAACT
CGGTAATATTGACATTATTGTTGTACCACGTGGCTGAAAAACATTTACTCTAGCCATATCCTCTTTGATACAAGGCATATCTAGGGGAGTGCATGAGTAA
ACTTCCGAAGAACTCTGATTCCATTGGCATTAGAATGGGATATATTGCCGGAAGATAATCTTGAATGTAGAATTGTGGACACAATAACACCGACTGTCAT
CAAATCACTGAACCAAAAAATAGAAAACCACTAAATCCCCATGAAAACATGGGAATGTTTCTTTCCCAGATGTGGAATTCTAGGATAGACATTTCGTTAA
GTTTATGCAATCATTTTTAAACACTCAGGTAACCAAATCCATAAACGAACAAAAATGCTAAAGGGAATTTGATTCAAGATGGTTTTAAATCTCAGATTAA
ACACCTATTACCCATATAGTGGTAGCTATCTGGCAAATCTAACTTCACATGACTTTGTTTAAAAATTTAACTTCTTTTGTTTTCTAGATTTTTGTAGGTT
CGCTACTTGGATGGGTCCTATAATATATGAATACTACACTGAACTAGTTGAATATATTATTTTCTTTGCTACAGGTGATGGGGGGTAAGGGCATCCCCTT
CATT
>LE_HBa0040L19_SP6_8628 (trimmed for quality and cloning vector)
TGTCCTCCGGACACTTGTTATGTTGCATCAAAGCTCTCATTCGGACTTCATATATTAGTTCCTGATCCCTTTACTCCAAATGCTATTCATCTCTATTTTC
TAAGTCAACCCTCCCTGCAACTCTAGCTAAGACTACAACCTTAGGTTCTAAACTCGGTAATATTGACATTATTGTTGTACCACGTGGCTGAAAAACATTT
ACTCTAGCCATATCCTCTTTGATACAAGGCATATCTAGGGGAGTGCATGAGTAAACTTCCGAAGAACTCTGATTCCATTGGCATTAGAATGGGATATATT
GCCGGAAGATAATCTTGAATGTAGAATTGTGGACACAATAACACCGACTGTCATCAAATCACTGAACCAAAAAATAGAAAACCACTAAATCCCCATGAAA
ACATGGGAATGTTTCTTTCCCAGATGTGGAATTCTAGGATAGACATTTCGTTAAGTTTATGCAATCATTTTTAAACACTCAGGTAACCAAATCCATAAAC
GAACAAAAATGCTAAAGGGAATTTGATTCAAGATGGTTTTAAATCTCAGATTAAACACCTATTACCCATATAGTGGTAGCTATCTGGCAAATCTAACTTC
ACATGACTTTG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.961253
Expected error %
0.0529047
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0040L19
Clone
Clone name
hba-40l19
LE_HBa0040L19
P040L19
Clone type
BAC
Contamination
none
Estimated length
114,065
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found