Clone Read LE_HBa0120B09_T7_87233

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0120B09_T7_87233
Primer
T7
ID from Seq. Facility
LE_HBa_120_B09-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1386 raw
Sequence
>LE_HBa0120B09_T7_87233 (raw untrimmed)
TCTGTGTATCGCCGGCGGGGGCATTCCTCCTCGCGAGGTCGGGACCTTGCCGAGTGCGTGCGCCAAGCTTGTACAGGCTGCAGTNAGAATGGCTTACAGC
AAGAGCACCCATAATTATCGAGATAACGCTACGAGATGCAATCCTTGGCTAAGTAGGAACATAGAGGCCTCTCGTGATGAGTGAGCGCATGCGACATTGT
ATAGATGTAGCGCTGAGTGTACGGCTAGCAGTATGTTAGCAATGAAGTCGTTCATGCTGCGCATTTACATGTAGTAATTGAGATGCTTTCCTATAGCAGT
ATATCGATACTGCGTAGAGTATGACTATCGGGTATTGTATCGTGTCGTAATGTATATGAATGCTCAATTNACTAGTGAGTGTGGAGCACTACGCGGATTC
GAATGTCCTGATGTGTCCGCTTAATTCTGTAGTGTAGTTTATGCAAACTATATCAGACTAGTATGTAGTTTTATATCTGGCTCTGTAGAGTCTCGTGTGG
TATGTCTATATATCAACAATAATTTATATGAGGTCCGATCTTGTGCATTGGTGCTGTTTAATATAATATATGTACTTGTTATTTTATATATGTATGGATA
TGTTGCTATATTTTTGAATAATGAATGTTAGTTTCTTAGACGATTTCGTGCATACGAAAGCTCGCGTTGATAGTGGATCATTGTTGTCTCTGTACCGTTC
GTATGATAGTGGTAAGATATGTTGTGTTATGTTTATGTATGACTGTTTGATTCGAGCTGTATCTTTAATTTCTGTTCTTATTTGATGTCTTAGTTTTATC
CTCATCTCCTGTCTCATTTGTCTGTCTTTCCGCGTTAGCTGTTAATGCACTTTATGCTTGTTCTCCTATTACAGTATTGTTTTGATCGTGGTATGTACTT
GTGGTTTGTTTGATTGTGGTATAGTTTGTTCTCTGTGCTGATTGTTACGTCGCGTATGTGTGTTGTTGTCTCTGTTCTTCTTTCTCTGTTTTTTTATGTT
TATAAACATTTATGTATGTTGCTGCCACTTAATTGGTTTGCTGTTGAAGTGGTGTTAGTGGTTCTGCCTTGTTTGTACTGTCATGATTTGACTTTTGTTT
CTGGTGNGTCGTTGAGATTTTGTAATACTTTTCTTCTATGGATATAATCTTGTGATTGTCGTTTGTTCAGGTTGTATGATGTCTGCTGTGTTTCTTAGTG
CTTGTTGTATTGTTACTCTTATTGGTAGGTGCGTCAATGATGTATTGTCACTGTTGTCTTACTACTGTTTATGACATTATGATTAATGTGTCGCCTCGTA
TTTGATGATGTGACACTTTATTGTGACCTAATCCTTGATATGTAGTCTGATATAATCTTGTCAGGCATCGTTATGTTATGTCAACA
>LE_HBa0120B09_T7_87233 (trimmed for quality and cloning vector)
TG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.19668
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0120B09
Clone
Clone name
hba-120b9
LE_HBa0120B09
P120B09
Clone type
BAC
Contamination
none
Estimated length
132,815
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found