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Clone Read LE_HBa0120F07_T7_87421

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0120F07_T7_87421
Primer
T7
ID from Seq. Facility
LE_HBa_120_F07-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1305 raw
Sequence
>LE_HBa0120F07_T7_87421 (raw untrimmed)
AACGACGCTCGCTAGTCAGGCTCCGGGGAGCGTGCGCACCCTATAGATAGGCTTACCACTCACTGGCGAGGGANCTTCCATACCCTATACAATGAAGGAT
CGACTAAAACTCGCACCCCAGCCCACTCGTGGGAGCATGACAGGCAGCTAGATGAACGCATGATATCACCACTTGACGAGGAACCACTCCCTCTACGGAA
AGAGCCGATGAGCGTGGAGGAGAGCCTTTACCAGCCGCCATCGGCGCGAGTTGTCCTCAATGACCAATATGCCATCTAATGGACATACTATGCAGAATCG
TAGCTGCAAGCGCGTGGCTCTTGATGGCCGTGCAAGTTCATGTCCCTGGCCAGTTACGTACTCGCCCGCGGCGCTCGCATTCGGCGAAATAATCTTATTG
ACTATGTTGTACGCTATGCACTCCTACTCCTCCCTGCGTCCCCGACACCTACGACTCAATTGTTACGTCGCACTACTGTTCATTCAATGCGGAGTGAGAC
TGATTCGGTGACCTCTCATCTTATTACCGCGAGCTATCTCCCCCATATCGTGATCCACCGCCCGCGCCACCACCACGTAACGTTCCTCCACTTAATAACA
GCTCAGACTGACCTACGTATGATGTCTTCTCTGTGTGCTTATTTTATCTTTCTGGTCTCGTATGCTCTCACTGCTTGCACTACTACTCTATTTAGTACTT
GTCTCGTGCCTATTATTTATTCTATCCTTGACGCTGTATATGCCGGCATTCCTTCTGCAGCTGTTGGATTTTGTAGTTCGACTGCGATAGCTCGAGTCGC
TATGTGAGGAATAGGGTCGCATGTCTTCTCTCGTAGGATGACATTATTAGTTCTGCTCCTTATTGTGTCCTATTTACATGCAATGTCATCACTCTCTTAT
GCGCNCAAAGTACGGCAATGGCTCTACGTTTCGATGCGATGTATGAGAGATGGACCCTCTTCTGGCGCAGATCATGCAACGCTAAGTTCTCAGTCCTTGC
TCCCCTTGTATTACAATTTTCTCATTCAAATTAGTTCCATCACTCTCTTTGCTGTATTGCTTGTACACTGTCTATTATCACATTCCAGCATTCGAACATC
CTGCGTACGACTGATTACTCATAATGATCGACATTGCATGCGGCTGCACTGGCCTCCGCACTTTGGTCACGCTGCTATACCATCTCCTCTCCTGGTAACA
CTCACCAACTACCGTCTCGTGCACCTCCCCCTCATCCTGCTATCTCCACTAGACCCACTCTCTACTACTCTACATACACATAAGACACCGTCTACTGCTA
CGCAC
>LE_HBa0120F07_T7_87421 (trimmed for quality and cloning vector)
A

This is probably not a useful sequence.

Problems:
  • Low complexity
  • High predicted error rate
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0120F07
Clone
Clone name
hba-120f7
LE_HBa0120F07
P120F07
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found