Clone Read LE_HBa0120H16_T7_87535

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0120H16_T7_87535
Primer
T7
ID from Seq. Facility
LE_HBa_120_H16-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
261 trimmed for vector and quality, 909 raw
Sequence
>LE_HBa0120H16_T7_87535 (raw untrimmed)
CTCGGTACCGTGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTTTAGTAGTAAGTTTCAAAGTTTTGCAAAAGGATCTTCATTAGGTAATGTTT
GTGCTAATTAGGCAACTTTGGTACAGTTGTTTAGCTGATAACTTAATGATTTGAAAAAAAATCCGATTTTGTTGGTTTGTGTGAGGGGGTTGATTTGAAG
TTGGTNTCTTGNANGGGTGGGGNGTGTGTTTTTTTTTTTTTTTTTTTTTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTGTTTTT
TTTTTTTTTGTTTTTGTTTTTTTTTGTTTGGTTGTTGTGTTTTTTTGTTTTTTTTTTTTTTGTTTTTTGTAGTTGTTGTTTTGTTTTTTTTTTTTGTTTT
TGNTTTTTTTTTTTTTTTTTTAGTNGTTTGTTGTGTTNTTTTTGTTGTGTGTGTTTTTTCTTGTGGTGTGGTTTTGTTTTTTTTTGTTTTGTTTTTTTGG
TTTTTTATTTTTGTTTTTGTTTTTTTTGTTTTTTTTTTTTTTGTTGTGTTTTTTTTTTTTTTGTTGGTTTTTTTTTTTGTGTTTTTTGTTTTTGTTGTTT
TTTTGTTTGTTTTGTTTTGTTGTTTTGTTTGTTTTTTGTTTTTTTTTTTGTTTTTTGTGTGTTTTTTGTTTTGTTTTTTTTTTGTTTTTTATTTTTTTTT
TTTTTTTGTTATTTTTTTGTTGTAGTTTTGTATTAATATATGTTATGTAGGATTTTTATTTTTTTAATTTTATTTGGTATTTTTATTTAATAATATTATT
TTATTGTTTATGTGTGTAGTTGTATGGATGTAGTTTATTTTATTGAGTAATATTGATGTTGGTTTTTTTTTTTATATTTATATATTTGTATATATTGTAG
TTTATTTTA
>LE_HBa0120H16_T7_87535 (trimmed for quality and cloning vector)
AGCTTTTTAGTAGTAAGTTTCAAAGTTTTGCAAAAGGATCTTCATTAGGTAATGTTTGTGCTAATTAGGCAACTTTGGTACAGTTGTTTAGCTGATAACT
TAATGATTTGAAAAAAAATCCGATTTTGTTGGTTTGTGTGAGGGGGTTGATTTGAAGTTGGTNTCTTGNANGGGTGGGGNGTGTGTTTTTTTTTTTTTTT
TTTTTTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTGTTTTTTTTT

This is probably not a useful sequence.

Problems:
  • High predicted error rate
  • Low complexity
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.788696
Expected error %
5.30709
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0120H16
Clone
Clone name
hba-120h16
LE_HBa0120H16
P120H16
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found