Clone Read LE_HBa0120O09_SP6_87856

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0120O09_SP6_87856
Primer
SP6
ID from Seq. Facility
LE_HBa_120_O09-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
682 trimmed for vector and quality, 797 raw
Sequence
>LE_HBa0120O09_SP6_87856 (raw untrimmed)
GAGTATCTTGGGAAAGCAAGATGACGATCGAAGGATGAAGAAAAACTTACTCTTAGAAATACACAACAGAAAAGTGATTAAATGAAAAGGAGAGGCCACA
TTTTTATATTTGTTTTCAACATAGAACAGAATGTTATGTTCTTACAAAAAATCCATACATATTTTTATAGATATTTGAACTCCTGTTTTAAGTCAACTTT
GTACAACTCTCCATCAACATCTCTTCTTCTGTTTTTCCACAATAGTTTTCAAACTTGTTAGGTACATTCTATAATTTTCCACAAGACCTTTTCACATCAA
TTTTTCTGCCTAGTTGTAGTAGAAAAAACTTAATGGGGCCAAAGTTAATACTTGTCCCCTATTATATTGACTTGATTAATGACAAGTTGATGTTATTAAA
TACAGGCATGTGACAACTTGATCTTATTCTATTCCAATATGTAATAATAATCTGACATCAAATAGTTCTTTTTAAGAAATCATGATCAAACATTGAGACA
CGATTCGGTACTTTTTAGATGATTTCAGAGGATATAAAATTACTAAAATTCTGATGACACTTGGTAATTTATTTGTCTTTTCAACTACTAATATGATACT
TTGTTCTCTCATTAACAGAACATTACTTATTATACAAAGATTACTGGCTCTTTCAATCTTCAATCAAATCCGCCGTCTCGTCCTTCTCTTCTGTGACCTT
CTCATTTTCTTGGGGAAAATGCCTTCAAAAAATTCGACAAACCCTTTTTGGCCTTACGATATTTAAAATTAAGGTTCCCCTTCTCTATTCCATTAAC
>LE_HBa0120O09_SP6_87856 (trimmed for quality and cloning vector)
TGACGATCGAAGGATGAAGAAAAACTTACTCTTAGAAATACACAACAGAAAAGTGATTAAATGAAAAGGAGAGGCCACATTTTTATATTTGTTTTCAACA
TAGAACAGAATGTTATGTTCTTACAAAAAATCCATACATATTTTTATAGATATTTGAACTCCTGTTTTAAGTCAACTTTGTACAACTCTCCATCAACATC
TCTTCTTCTGTTTTTCCACAATAGTTTTCAAACTTGTTAGGTACATTCTATAATTTTCCACAAGACCTTTTCACATCAATTTTTCTGCCTAGTTGTAGTA
GAAAAAACTTAATGGGGCCAAAGTTAATACTTGTCCCCTATTATATTGACTTGATTAATGACAAGTTGATGTTATTAAATACAGGCATGTGACAACTTGA
TCTTATTCTATTCCAATATGTAATAATAATCTGACATCAAATAGTTCTTTTTAAGAAATCATGATCAAACATTGAGACACGATTCGGTACTTTTTAGATG
ATTTCAGAGGATATAAAATTACTAAAATTCTGATGACACTTGGTAATTTATTTGTCTTTTCAACTACTAATATGATACTTTGTTCTCTCATTAACAGAAC
ATTACTTATTATACAAAGATTACTGGCTCTTTCAATCTTCAATCAAATCCGCCGTCTCGTCCTTCTCTTCTGTGACCTTCTC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.924079
Expected error %
0.484854
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0120O09
Clone
Clone name
hba-120o9
LE_HBa0120O09
C12HBa0120O09
P120O09
Clone type
BAC
Contamination
none
Estimated length
91,890
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found