Clone Read LE_HBa0139D12_SP6_88102

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0139D12_SP6_88102
Primer
SP6
ID from Seq. Facility
LE_HBa_139_D12-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
644 trimmed for vector and quality, 938 raw
Genbank Accession
Sequence
>LE_HBa0139D12_SP6_88102 (raw untrimmed)
CCCCTAGTTTGTAATTAAAACGATTCTATCAAGACCAACTACCAAGAACTGAACTATAGAGAATTTGATAGATCCACTTATCAGAAGTGATTGTCAAGCT
ACATACTAACCCATGACCCGAATCTAAACTGAAACCCCTTGGACATAACACAATAATCATGACTAATCCTTTCTTACAAAATCTTTTCTCACATAGCAAA
GATAACGTTCCATTGATACTAGCTACAACCAGAAGTGAACCTGAACCAATCATCACATACTTATAGTGCACAAACCATCACACATCTTATAACGATTCCC
TTTTCAGAACACAATCTTTTTACAAGCTTAAGTTATAAAAGTTTGATGTTTAGACATCGAATACTCACCAAGGGATAATCAAACATATCTAATCCAAAGA
AGAACAAGATCAAGTATGCACCCTACAAATGGTACACGCTAGGATGCATAACCTTTTACAACACTGTCGGATAACCGTAACTATTCTCAAAAGCTCTTTT
GTAAGTTCCCAGAAGTAAGGTTGTACATATAAAAATAATGATATATTTCTAATTTTTCAAACAACATCAAATATGTCATAACTGAAGTGAACAAGTCTAA
CCAAGGATCCTACCTTATCAAGAAGATATAAGAGGATCGGTACATCCGATCCACCACTAGAAATCCACCCATAGATGTAGAAAAATACACGAGTATATGG
AACGAATCCCACTCTAAACCTTTTTTTTTAACCAAAGTAGGTGGTTACATAAAAATGTACAAAATCGAAGCCGGATATCAAAAGATACTCTTTTCTTTGA
AAACTTATCAACAATTATAGTTAAATGACTCATTATCAGATTTTTTTTTGCTGCCCCCTTCCACTAGCCCGAATATATAAAATCCTTCCCATACTCGATT
GCCAACCTCCCAACTTTCCCCAAATTTCCATCAAAGTA
>LE_HBa0139D12_SP6_88102 (trimmed for quality and cloning vector)
CCAACTACCAAGAACTGAACTATAGAGAATTTGATAGATCCACTTATCAGAAGTGATTGTCAAGCTACATACTAACCCATGACCCGAATCTAAACTGAAA
CCCCTTGGACATAACACAATAATCATGACTAATCCTTTCTTACAAAATCTTTTCTCACATAGCAAAGATAACGTTCCATTGATACTAGCTACAACCAGAA
GTGAACCTGAACCAATCATCACATACTTATAGTGCACAAACCATCACACATCTTATAACGATTCCCTTTTCAGAACACAATCTTTTTACAAGCTTAAGTT
ATAAAAGTTTGATGTTTAGACATCGAATACTCACCAAGGGATAATCAAACATATCTAATCCAAAGAAGAACAAGATCAAGTATGCACCCTACAAATGGTA
CACGCTAGGATGCATAACCTTTTACAACACTGTCGGATAACCGTAACTATTCTCAAAAGCTCTTTTGTAAGTTCCCAGAAGTAAGGTTGTACATATAAAA
ATAATGATATATTTCTAATTTTTCAAACAACATCAAATATGTCATAACTGAAGTGAACAAGTCTAACCAAGGATCCTACCTTATCAAGAAGATATAAGAG
GATCGGTACATCCGATCCACCACTAGAAATCCACCCATAGATGT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.933346
Expected error %
0.380014
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0139D12
Clone
Clone name
hba-139d12
LE_HBa0139D12
C10HBa0139D12
P139D12
Clone type
BAC
Contamination
none
Estimated length
115,278
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found