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Clone Read LE_HBa0143C01_T7_88801

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0143C01_T7_88801
Primer
T7
ID from Seq. Facility
LE_HBa_143_C01-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1153 raw
Sequence
>LE_HBa0143C01_T7_88801 (raw untrimmed)
TTAAAAAGAGAGTCCGCACCTCATGCGGAAACGCAACATGAGGCACCAAACAGACACGGCAAAGAACGACAACGAAGGAAATGCACAACGAAGAGGACAA
ACCCCCATATCAAGGGCAGCCACCTCTCAAGACAAGGGCGAAACCCAAACCACACACCCCCTTCAAAGAGGCCCCCCCCCTTTTATAAAAACAAATATAA
CAAGAACACCAGAACACCATACGTACCGAAACAGAGACGCGGGGGGCCGAAACAGCCGCCCCGACCGCCTACACCCTCTCCTCAGACGAACANCAATCGA
AATAGCTACCCCACACAACGCAATGCCAAGCCTCAAACACGCCGCAGATCAGGACACGGCAGAGTTAACTCCACAGCTATCACACAAAGACTGAAGCACT
GTACGAGAGAGAAAGGAGAGTATGCGGATGGGAACTCCTCCCCGCAAGCCTGATGGTAGTTAAGCGGAGCAGCCTAGAACGGTGACCAGGCGACACGCCC
GGAAACGCGGGGGAACAAGAGTGGAGAAGTCGACCAGACAGCAATTGACTCCCAGCGCATCAACAAACAGACGAAACTTGCAGAATCAGACCACAGCACA
CACACTAAAACAGTCCGAGAAAAACACCAAATCAACCGAAAAGAGAAAATAACCGATAAAAATAAAAAAACATTCATACTAGGACCAACGACAGCGCGAG
GAGCGGGCAGAACGGAGAAGGAGAGAACGAAAACGAACAGAAAAGAATGGAAAAATAAAAAACTCGGTGCAAAATGAATAGCAAGAACACACACCACACC
AACGGACAGAGAAGCACAAGAACGGAGAAAAACACGGCCAAAAGATGCAACACGGAGGCAAGACAGAATCAAGAACAGACAGGAAATATTGGAAGAAAAA
AGGAACCAAGAGCGGAATAACATACGGTGAGACACAACACGCAACGCNCCACTGACAATGAAGAACAGAAGAGAACCACGAATGACCGCAAGAAATCAGC
ACGAGCTCCTACCTGAACCCGCAGGCACCACATAGCAAGCAATCAAAGTACGAAACTTGAGACAACGCAGACAGTGACACAAGCCATACGAACAACCGAA
CCGGTGCCAATAGACGAAAACAAACAGAAAACCCACACAGCATCAAATAGACC
>LE_HBa0143C01_T7_88801 (trimmed for quality and cloning vector)
AG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • High predicted error rate
  • Short cloning insert
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
5.39716
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0143C01
Clone
Clone name
hba-143c1
LE_HBa0143C01
P143C01
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found