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Clone Read LE_HBa0029D02_T7_91923

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0029D02_T7_91923
Primer
T7
ID from Seq. Facility
LE_HBa_029_D02-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
641 trimmed for vector and quality, 797 raw
Genbank Accession
DU054418
Sequence
>LE_HBa0029D02_T7_91923 (raw untrimmed)
AGCTGGGTCCCGGGGGGACCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGGCCTTTTCGAGTGAATTGTCTTCCAGCTTCTTATACTGTATAGACCAAG
AAACATGTACAAAGACCAAATCAAAATGATATAACACCAAGCAGAACTATAAACGGGTGCTAATGTATCTCTAAATTGGGGCGGGGGACTCTAAACTCAA
AAAATATCCCATAGGTGAATCCGTAACTTCCAAATTCCAATTCAAGCGCTAGTTCAATAAAAAGTATTGGCTACATCTTATAATCTGGATGTACATAAAA
GGATCAGGGAATAACTGAGCTACCATAAAAAAGAATGCTTCCACTTCAAGAACGGTCATCGGATAAAACAAAACATAAATGTAAAAACTATAGTCGCTAG
ACAAACGTTGTACCACCTCATATGACCAACCAAACATTTCAACGATGAATTTTAATTCCTCTCCTACTCAAATGTGTAGTGAAATTACTCAATTACTATA
CATAGATATTCAAAACTTACTCTTTCCCATAAGAAGAGAAGATCAGCATCCCTCTGGTTGACAACCTCCAATCGTGCAAAATCAATCTTGTTCGCCGGAA
GATTCACGGTGGCAGGGTCAAATCCTTGGTACAAATAAACTTTCTCAGGCTTGATTTCTTTGCTTCCTATTCCATAACATGAGATCCAGGCATTATAGTT
GTTTGAGTTGGAAATTCCTTTCCTTCCCATATCAAGACCAATATAGCCTTTCCCTTCTCAACGATCATGAACCAACCCCCCAAAACTTTGTTTGCCC
>LE_HBa0029D02_T7_91923 (trimmed for quality and cloning vector)
AGCTTGGCCTTTTCGAGTGAATTGTCTTCCAGCTTCTTATACTGTATAGACCAAGAAACATGTACAAAGACCAAATCAAAATGATATAACACCAAGCAGA
ACTATAAACGGGTGCTAATGTATCTCTAAATTGGGGCGGGGGACTCTAAACTCAAAAAATATCCCATAGGTGAATCCGTAACTTCCAAATTCCAATTCAA
GCGCTAGTTCAATAAAAAGTATTGGCTACATCTTATAATCTGGATGTACATAAAAGGATCAGGGAATAACTGAGCTACCATAAAAAAGAATGCTTCCACT
TCAAGAACGGTCATCGGATAAAACAAAACATAAATGTAAAAACTATAGTCGCTAGACAAACGTTGTACCACCTCATATGACCAACCAAACATTTCAACGA
TGAATTTTAATTCCTCTCCTACTCAAATGTGTAGTGAAATTACTCAATTACTATACATAGATATTCAAAACTTACTCTTTCCCATAAGAAGAGAAGATCA
GCATCCCTCTGGTTGACAACCTCCAATCGTGCAAAATCAATCTTGTTCGCCGGAAGATTCACGGTGGCAGGGTCAAATCCTTGGTACAAATAAACTTTCT
CAGGCTTGATTTCTTTGCTTCCTATTCCATAACATGAGATC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.957821
Expected error %
0.412547
Sequence Annotations 
Automatic Annotations
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At1g62710.1 Score 70 E Value 1e-12 Identity 23.40% Align. Length 140bp (21.84%) Frame 3
68414.m07078 vacuolar processing enzyme beta / beta-VPE identical to SP|Q39044 Vacuolar processing enzyme, beta-isozyme precursor (EC 3.4.22.-) (Beta-VPE) {Arabidopsis thaliana}
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
emb|CAB42651.2| Score 92 E Value 8e-18 Identity 29.90% Align. Length 146bp (22.78%) Frame 3
putative preprolegumain [Nicotiana tabacum]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
dbj|BAD94396.1| Score 70 E Value 4e-11 Identity 23.40% Align. Length 140bp (21.84%) Frame 3
beta-VPE [Arabidopsis thaliana]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0029D02
Clone
Clone name
hba-29d2
LE_HBa0029D02
C08HBa0029D02
P029D02
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found