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Clone Read LE_HBa0047M08_SP6_9422

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0047M08_SP6_9422
Primer
SP6
ID from Seq. Facility
LE_HBa_047_M08-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
731 trimmed for vector and quality, 902 raw
Genbank Accession
Sequence
>LE_HBa0047M08_SP6_9422 (raw untrimmed)
GCCTAATCGTAAACTCACTCGATTTTTCTAAATTCATAAGTCAAATGTTAGGATAAATTTAAAGCATATCTTATCAATATATATTTTCTTTCGAACATAT
AACTTCTACATTATTGTATCGAGGTTCAATAATTTATGGGAATATTACACGGATAAGCAAACTTATATTATTTAATTACTCATCATAGCTATAATTTGCT
ATAATTATCACTTGCGACTAACATTATACATTAATTACGTGGGTTGACTTCGAGTTTGTATAATTAGTCATGTTTGTATATGTATAATTCGCCAGGATAT
ACTAATAAGTATGTATAATATACAATTTTTTAGCCTATATACATATACAATTCACCTCTCTCTGCCCTCTCTCGCTCGCCTATCTCCTCCCTCTCCCAAT
CTCGCTGTCATTTATACAAATGTATATGTAAAATATACAGTAATATACAATTGTACACATATACAATTCACCTCTCTCCCACTCAGCCCTCTCTCGCTCA
CCTCTCTCCTCCCTCTGCCGATCTCGCTCGCCTCTCTCCTTTCTCTCCCAGTCTCGCTCGCCTCTCTCTTCCCTCTCCCAATCTCTCTTGCCATATATAC
AATTGCATATGTATAATATACAATTATCTAACCAACATACACATACAATTCACCTTTCTCCCACTCTTTTCTCCCTCTCTCTCTACTCTCTCCTCTCTCT
TCCCGTCTCTCCGCTTCTCTCCTCCAAATAACATGTAGCTACAATTTGTAATTATCAAACTATATCCATTGAGAGTAATTATTATTTTTAAGTGGTTATA
TGTGAAAAATTCCCTTAATTTTACGGATGAACTTTGAAAGTTTCGTAATAATGTCTATTTCCATTTCCATCATCAAATCAAATTAAAAAAATTGTAAATA
CC
>LE_HBa0047M08_SP6_9422 (trimmed for quality and cloning vector)
TTTTCTAAATTCATAAGTCAAATGTTAGGATAAATTTAAAGCATATCTTATCAATATATATTTTCTTTCGAACATATAACTTCTACATTATTGTATCGAG
GTTCAATAATTTATGGGAATATTACACGGATAAGCAAACTTATATTATTTAATTACTCATCATAGCTATAATTTGCTATAATTATCACTTGCGACTAACA
TTATACATTAATTACGTGGGTTGACTTCGAGTTTGTATAATTAGTCATGTTTGTATATGTATAATTCGCCAGGATATACTAATAAGTATGTATAATATAC
AATTTTTTAGCCTATATACATATACAATTCACCTCTCTCTGCCCTCTCTCGCTCGCCTATCTCCTCCCTCTCCCAATCTCGCTGTCATTTATACAAATGT
ATATGTAAAATATACAGTAATATACAATTGTACACATATACAATTCACCTCTCTCCCACTCAGCCCTCTCTCGCTCACCTCTCTCCTCCCTCTGCCGATC
TCGCTCGCCTCTCTCCTTTCTCTCCCAGTCTCGCTCGCCTCTCTCTTCCCTCTCCCAATCTCTCTTGCCATATATACAATTGCATATGTATAATATACAA
TTATCTAACCAACATACACATACAATTCACCTTTCTCCCACTCTTTTCTCCCTCTCTCTCTACTCTCTCCTCTCTCTTCCCGTCTCTCCGCTTCTCTCCT
CCAAATAACATGTAGCTACAATTTGTAATTA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.909989
Expected error %
0.208203
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0047M08
Clone
Clone name
hba-47m8
LE_HBa0047M08
C08HBa0047M08
P047M08
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found