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Clone Read LE_HBa0091E17_T7_95073

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0091E17_T7_95073
Primer
T7
ID from Seq. Facility
LE_HBa_091_E17-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
418 trimmed for vector and quality, 888 raw
Sequence
>LE_HBa0091E17_T7_95073 (raw untrimmed)
AGATGCCGGGGTCCGGGGGGTATCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTACATAGAAAAAGATCACAAAGCTAGTGCACAACATCAATGTCAAC
TGAATCCCTTGATGAAATAAGATGAGAGAAAAGAGGTAATAAAGTCGTTAGATGCCTAAATTATGTACCCAAACTCTTACAATAAGTGGGTAAGTCCGGT
ACAATGAGTTCCCAAGAAGGGAGGTATGACTGTGGTAAGACACATAAAGAATGAGTTGATTCCTACAAGGACAGTTACCTGGTGTAGAATTTGAATCGAT
TACCGGAAATTGAACAATGCTACACGGAAAGATAACTACCATGTTCCGTTCATTGATCAGATGTTTGATCGACTAGCAGGACAACAATACTATCATTTCT
TAGATGATCATTATTGTTACAACCAGATCTTGATTGCAACTGAGGATCATAAAAAAACCATGTCAACTTGTCTCTACGACACATATGTTTTTAAAACTCA
TGTTATTTATAATTTCGTAATGCAGCAGCAACTTTTTCAAAGGTGAATGACTTACATTTTTCAAGTCTTAGTGCAAGACTTTGTGGAGGTGTTCTCTGTA
CATTTCTCCCTCCTAAAATGGAGTTTTTGGAGGTATGTCTCATATATGTCAACAAAGCACCCGCTAAAATAGAAAACACAAACACTCATCTCCTGCACTA
CATTTGTGTTTCTTGGCTTGTCTCCGGTATCGTTTTGGTATATACACTTACATAAAATGTGAAAGAGTAACAAAATTTTATGTTATACTCATTCCTTTTT
ATTTTCTTCTTTTTTCTTTAACTGTATTCATTTTTTCCTTAACCTAAGTCTCTTTATTTTAAAGCTATCATGTTGATATATACTTAAT
>LE_HBa0091E17_T7_95073 (trimmed for quality and cloning vector)
AGCTTTACATAGAAAAAGATCACAAAGCTAGTGCACAACATCAATGTCAACTGAATCCCTTGATGAAATAAGATGAGAGAAAAGAGGTAATAAAGTCGTT
AGATGCCTAAATTATGTACCCAAACTCTTACAATAAGTGGGTAAGTCCGGTACAATGAGTTCCCAAGAAGGGAGGTATGACTGTGGTAAGACACATAAAG
AATGAGTTGATTCCTACAAGGACAGTTACCTGGTGTAGAATTTGAATCGATTACCGGAAATTGAACAATGCTACACGGAAAGATAACTACCATGTTCCGT
TCATTGATCAGATGTTTGATCGACTAGCAGGACAACAATACTATCATTTCTTAGATGATCATTATTGTTACAACCAGATCTTGATTGCAACTGAGGATCA
TAAAAAAACCATGTCAAC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.958133
Expected error %
0.995426
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
pir||D84513 Score 142 E Value 3e-33 Identity 17.90% Align. Length 407bp (97.37%) Frame 1
probable retroelement pol polyprotein [imported] - Arabidopsis thaliana
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAD19780.2| Score 142 E Value 3e-33 Identity 17.90% Align. Length 407bp (97.37%) Frame 1
hypothetical protein [Arabidopsis thaliana]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0091E17
Clone
Clone name
hba-91e17
LE_HBa0091E17
P091E17
Clone type
BAC
Contamination
none
Estimated length
128,722
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found