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Clone Read LE_HBa0108H19_T7_95989

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0108H19_T7_95989
Primer
T7
ID from Seq. Facility
LE_HBa_108_H19-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
5 trimmed for vector and quality, 880 raw
Sequence
>LE_HBa0108H19_T7_95989 (raw untrimmed)
TTCGGATCCCCGGGGATCTCTAGAGTCGACCTGCAGGCATGCAAGCTTATAGAGAGGTTATAATCCCCTCCTGTTACTTGTGCATTTTATGACCATTTTT
TTCTTGATTCTACCCACTTTCCTAATTAATATGGTTTGAAGGGTAGATCCTCATACTCGGATAACTCTACGAAGAACACCAGTGGTATAACCATTTCTTG
CTGGATGCTAGCCATAAGTAAATCACAGTTTGTCGACGGAATGAATGACTTACCTCGGTGGATCCACTAATCTGCGCTTAAAAGCACTTAAAAATTCTTT
TACAAATTATTAAATTTTGACGTCCCTTGATGGCTACCGAGTTACTGGGGACTTCACACACCTCACCTAAATAACTACACTTTATTTTCTCCATAATACT
TTTGAAATTTACAATTTCTATTTTTTCACCCCTATACTCTATCCTCTCCTTCTGAAACCCCCACTCTACCCCCCTCATTATATATCACTTGATTATTAAA
AACTGTTTTTCTACTTAAAAATATAATTTCTTTGCATCTCCACCTTCGTCCTCCTATCACCCTCACCACACTCTGTATACAAGAATTCCATCTCTTTCAC
CTATTGCCCTGTATATTAACTAATATACTTACAATTTCTTTTAGTAGGTTGGTTTACTATCTCCTTACTCTTTATACTTTTCTTCTTTATTTTTACTCAT
TTTTTACTTAATATTTTTCACGTCCTTCCTTTCTTTATTATTCTCATTGATCGGTGTATGCAGTTTACTGTATCTTTTAATTTTACCTAATATTTGGAAT
TGTATATTTAGTATTAATGCTCTTTTTCTCTTTTCTACTCTTTACCTTGGCTTTGTTTCTTCTCTGTGTTGTTTTTGTAN
>LE_HBa0108H19_T7_95989 (trimmed for quality and cloning vector)
AGCTT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
not recorded
Expected error %
1.26133
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0108H19
Clone
Clone name
hba-108h19
LE_HBa0108H19
P108H19
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found