Clone Read LE_HBa0108I03_SP6_96004

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0108I03_SP6_96004
Primer
SP6
ID from Seq. Facility
LE_HBa_108_I03-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
299 trimmed for vector and quality, 820 raw
Genbank Accession
Sequence
>LE_HBa0108I03_SP6_96004 (raw untrimmed)
AGTTCGTTTTTTTAACCGTACCCTANTNANNNTNNNTTNNNNNTTTTNNNNNTNNNTTATNTNANTTTTNNTATATANNATCCCTTTTTACCTCCTTCNA
TTCTCCTTTAATCTTAAAAATCCACCTTTTTAACCCTCAATCCCATATCACTCCATAATTAAAGTCTTAACTAACATCTATT
AAAATTTTTGGCAAAACT
AACATCTAATCATTCTTAATCACCAAAAATCCACTTAATATATATACCACAAAAATTAACAAAATAAGGAGTTTACCTGCTTTAACACTCCTTAAACCTA
TAAAATATATTGTTTTATCCATAAAGTCAAACTACATCTATATCTAATGTCTTAGCGAACGTCCATAAAATTTTTTGGTAAAAATAATATCGAAATTTTG
GATCACCAAAAATCCATGCACTATTAGCACACATAAATAAATTAAATGAAGGGGGGGGGGGGGGTTACATGCTCTGATATTCGTTTGACCTGAAAAATGG
ATCATATTGGTTGTATGAGCCAACTTGTCGATAGCTATTGTCTTAACAGACATCCATGAAAAAATTGGTGGAACAAATGACACCAGAAATTCTGGATCGC
CAATAAACCATATTCTATTACACGCGAAAATTGGGAGAAATGGGGGGTATACTTGCTCAGGGGCTACGATTCACCATTAAAATGGATAGCTTTGGGAACG
ATCGCCTTCTGCTCACAAAAAGTATGTCTTTCCCACGCTCTCTCAAAATATTAACAAAAATACACTTTCCCCACTTGGGAACCCAAAGATAAAGGTGGAT
CTTTAACACCCCCAAAATAA
>LE_HBa0108I03_SP6_96004 (trimmed for quality and cloning vector)
AAAATTTTTGGCAAAACTAACATCTAATCATTCTTAATCACCAAAAATCCACTTAATATATATACCACAAAAATTAACAAAATAAGGAGTTTACCTGCTT
TAACACTCCTTAAACCTATAAAATATATTGTTTTATCCATAAAGTCAAACTACATCTATATCTAATGTCTTAGCGAACGTCCATAAAATTTTTTGGTAAA
AATAATATCGAAATTTTGGATCACCAAAAATCCATGCACTATTAGCACACATAAATAAATTAAATGAAGGGGGGGGGGGGGGTTACATGCTCTGATATT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.896596
Expected error %
2.42073
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0108I03
Clone
Clone name
hba-108i3
LE_HBa0108I03
P108I03
Clone type
BAC
Contamination
none
Estimated length
107,696
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found