Clone Read LE_HBa0109L03_T7_96917

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0109L03_T7_96917
Primer
T7
ID from Seq. Facility
LE_HBa_109_L03-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
596 trimmed for vector and quality, 958 raw
Genbank Accession
DU058311
Sequence
>LE_HBa0109L03_T7_96917 (raw untrimmed)
GTTTTGGGGGTCCGGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTCTTACCCAACAATGTTGTTTATGAAATGAAACGCAAGCTCCGGGAG
ATGAAGCAGATGGGAAGTATTAGGGCCTATGTGAAAGAATTCACAATCTTGACCTTTCAGATTCCCCAACTCACGGAGGATGATATGATGTTCACTTTCA
TGGACGAGCTGCAGAATTGGGCGAGGACCGAGTTAGAGCGGCGTCAAGTAAAAACCATCGATGAGGCCATCACTCAAGCCGAGACCTTGACAGATTTCAA
AAATGATCGTTTGGACAAGGCAAAGGGCAAGGAGGCAAGGGGCAGTCAAGCTAAAGGTGGGGGAGACCGTGGTCGAGGCAGAGAACAGTTTGCACAACCC
AAGCAGCAAGACACGCCCAAGTTCGATGGCAGACAGTTTGAACGCCGGAAATTCTCGGAGAAGCGGACGCAGTCCAGCAGAGGAGACGGGTGCTATATAT
GTGGCGGACCACACGGTTACGCCAGGTGCCCAGAGATGAAGAGTCTTAGTGCCATCCTCCGTGAGCGGAAGGAAAAGGAGGCACAAGACAAGGCATAACC
GGCAGACACCACTCAGTTGGGCATGGTTGGAATCTGTGGTGCCATAGCAAAGTCCGTTTATTACCCGGGGGCATTTCTTTCCATAATATGTGGATATCCT
CATCTATGGGCATTTTTTTTTTGCTTTTTTTTATTTTTTTGTTTTTCCTTATTTTTTATCCTAGCCGCAGTATAAAATTGGGGATGTTATAATGTTCCAG
CATTCAATCGCCCTGTGACTTGCACGCCCCTCTAATCCTCTGTTTGTGATTCGTCTTGAGGTTTCTTTCTTTTATAATGGTGTTATGGAGGTTACTTATA
TCTCGCCTTCTCTTTGTTCTCCTGTTTTTGTATTTCTCGGTATTTTTTATTTTTTTCT
>LE_HBa0109L03_T7_96917 (trimmed for quality and cloning vector)
AGCTTTCTTACCCAACAATGTTGTTTATGAAATGAAACGCAAGCTCCGGGAGATGAAGCAGATGGGAAGTATTAGGGCCTATGTGAAAGAATTCACAATC
TTGACCTTTCAGATTCCCCAACTCACGGAGGATGATATGATGTTCACTTTCATGGACGAGCTGCAGAATTGGGCGAGGACCGAGTTAGAGCGGCGTCAAG
TAAAAACCATCGATGAGGCCATCACTCAAGCCGAGACCTTGACAGATTTCAAAAATGATCGTTTGGACAAGGCAAAGGGCAAGGAGGCAAGGGGCAGTCA
AGCTAAAGGTGGGGGAGACCGTGGTCGAGGCAGAGAACAGTTTGCACAACCCAAGCAGCAAGACACGCCCAAGTTCGATGGCAGACAGTTTGAACGCCGG
AAATTCTCGGAGAAGCGGACGCAGTCCAGCAGAGGAGACGGGTGCTATATATGTGGCGGACCACACGGTTACGCCAGGTGCCCAGAGATGAAGAGTCTTA
GTGCCATCCTCCGTGAGCGGAAGGAAAAGGAGGCACAAGACAAGGCATAACCGGCAGACACCACTCAGTTGGGCATGGTTGGAATCTGTGGTGCCA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.965756
Expected error %
0.58652
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAD13304.1| Score 101 E Value 1e-20 Identity 10.60% Align. Length 539bp (90.44%) Frame 3
polyprotein [Lycopersicon esculentum] pir||T17459 polyprotein - tomato
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0109L03
Clone
Clone name
hba-109l3
LE_HBa0109L03
P109L03
Clone type
BAC
Contamination
none
Estimated length
130,101
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found