Clone Read LE_HBa0132O12_SP6_99382

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0132O12_SP6_99382
Primer
SP6
ID from Seq. Facility
LE_HBa_132_O12-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1272 raw
Sequence
>LE_HBa0132O12_SP6_99382 (raw untrimmed)
AGGCTAGAGGCGGCAGTACTGTACGCACTGCAGAGGCCGACACTCCAGTCAGTACGACTTCTGACATAAGCACGCAGCCAGGAACCTCACGTGACGGCGC
TCTTCCGTGGGCTACACCTATGATGAATGGCTTGCTTAGATCCATTATGTGGTCCGCATGGGCACGTATGTCTATACACGTGCCACGCGGTACAGTANTG
CTTGCTTGTATTTACAGGAGTCCGAGGAGAGCGTCGCCCGCGTTGCAGGGATTGATCGTGAACGTGAAACAGCATGACGTTATGTCGTTATCTCAGTCTC
CCTGTTCTATGCGCCCTCGCCGGCTTGGGACAGCTCTCAGCAACGCGCCAGCGCACCGCGACTNATAGGAGCGTTCCGCGTGGACTACCGTACATGGCAC
TTGCATCTTCCCATCTGACTAGTCGCGGTTGACTTGTTCCTATGATGTCCTTATGATGATGGCTAACTAATAGTGGATTGTTGCTGAAGTCGAACAATTC
TATCCGGAGGTAGGTGCCCTTTCGTTCTGCCACTAGTGACTGTAGTGTACACCGTGTCACTACTGATCTCGCTGTATATACTATGTATGATATTATATAA
CAGTGATTCGCTGCTAGGTCGAGCGGCTCAGACGATCGTGACAATGCAAAATATAGATGCGACAAGTCGTGCTTAGTCCTATCAAGATGCCTAATGTGCT
GTCAGACTGCAGCCTGACAGATAACGTGGTGACACTCCTGTCTCTAGTGTGGCTATATGTATCTTGATAGATTTTTCACTCTACAGTGCATGCCCGACGG
TGTCCACACCGCATATCACTTGTCCACACTTACCCGAATCACTCTAAACGATATTCAACGCTACAAACAGTAGCTGCTACCGCTCGCTGTGCTACATCTC
GTGGGCACATGCCACCGTCTCGGAGTCCCGAGATAGCGATGTGACTATGAGTATTAGCATATGGATACGACTGGAGTTGCCTGAGATAACTCGGGTGACC
TACATTTGATATCGGGGTAACGATACNCTCTCTCATCGCGCCTCTCATGACTGTATACACCTCCAAGCGGACTTAGCTTGCGCCAACCACGGTACATCAA
CATGCGGCCATGAGTATAAGATGTACGCTACTAGTACGAAATCAGTGCAATGACGGCGGTATTATGCGCATTTCGCGTAGACTGCGTGGTGGCGCTCGCT
TCTCTTACGGACATACCAACGCTGGTCGGGTATAGTTACAAGGAGAACTCACGAATTAGATACACAAAACTA
>LE_HBa0132O12_SP6_99382 (trimmed for quality and cloning vector)
AT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.89662
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0132O12
Clone
Clone name
hba-132o12
LE_HBa0132O12
P132O12
Clone type
BAC
Contamination
none
Estimated length
88,674
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found