SGN Marker TG652
SGN-M78
Synonyms |
Locus associations |
RFLP details |
Insert size
2600
|
Vector
pUC
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image
TG652 image not available
|
Forward sequence
AGGAGGATTCTGATGATTATAATTATACACTGTAAACACAGAAGCAGCTAGCTCAGATATGGAAGATAGAAATTTAAGGACTTGGAAAGT
TCATAGGCATCTGGCGGGGATCTGATAAGGAAGGGCAGAGGAATCAGTGACGCTACTAAGAATAGATGGCCAAACAATTGAACCAAAAAC AAGGAGAAGTGATTAACAGGAGCAGGAATTAAAAAGGTTGAAGTGGAAAATCAGCAATGATGGGAAATAGGTGAATGGAAAATAAAAAAA CAGTGAATTAAATCGTACAGAGAATATAGGCTTCCTATTGCTTCTACTGAAAAAAATTAAAGGTGAAATTTACTTCATTTGGCTGCATTC TTCTTAAATAATATAATCTACTTCCTTAACTGAAGAACACAACCCACTTGCAAGAATATCAGTACCTGAAGTTTGTTCTGTTCTCCAAAT ACATTTATAGAAGCACGTTGTAAATGAAGACAGAGAACCTGCAAGGTGGCACAACAGTAAGCACATGCAAAAGAGTCAACAAATAAAACA CATGAAAAAACCATTAAATCACAGAGCGCTGAAGCATCAAGTATTAAAATTAAATCCTATTTGCCCCAAGTGACATGTAAAATGTTACTC CTTGACGATCCCTTATTTTCCTCGTTTTATAATTTTGTTGGCAGCTATATGGT |
Reverse sequence
TGTACTGTGCGACATGGAAGAACTGTTCTAAGTCCAAGGAGATTGATGCATGCCATGACTTCTCACATTCCTGGTTTCAATCTAACTAGC
CAGCAGGTATTCTTTTCTTCACAGTATGCGGACAATTATCACTAGTACTAGTGTTTTAACTTACATATTTCCCAAATGTAGGATGCAGAG GAAGCACTCTCCCATCTTTTATCTTCTTTAAGAGCCGAACTGTCAGAATCTTTTGTTCATGATCACAGCTCTTTGGCGGATGTAATTACA CTTCCTAATTCTAGGATTGTTACACAAAGGATGAAAGGAGAAAGTGAACAGGAGAGATGGAGGCAGAGTTTTCTTGGGCCTTTTGATGGG ATTCTTGGTAGTTTTTTAAACTGCCAAACTTGTTCGTTTCAGGTTGAATGGTACTTGAAAGAACATTTAATATCATACAATTTAATTATT GCCTGCTGTATCTTTTTGCACATTATAGAACTTGTTTGCTAAATTTACAAAGAATATTCTAGAGTTGCTTTGCTGTGCTAGCCCAGGCGC TCATGCAATCTGTGATATTGATTTCAAGTTGCTGTAAAAGGGAACAAACTGTTACCTAATGGATAATTTTTTAAAGAAAAATAATTAACT AACTGGTGTCTATTGTACATTGAAAGTGAGAAAAGGTCAAAACATCAAAAGATTCAAAAGTCTTTTTACTTTCTTAAACTTTGTGCCAAG TCAAAAC |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U169970 | 4.2e-30 | 66 (9.7% of RFLP seq) | + |
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| ![]() Potato meta-QTL consensus map |
| ![]() Tomato-EXPEN 1992 |
| ![]() Potato-TXB 1992 |
Overgo hybridization and physical mapping |
TG652 was used as an overgo probe on plate 9 [well E11]
Plausible BAC Matches: None
Non-Plausible BAC matches
Overgo Sequences
A sequence
CTGATAAGGAAGGGCAGAGGAATC
|
B sequence
TCTTAGTAGCGTCACTGATTCCTC
|
AB sequence
CTGATAAGGAAGGGCAGAGGAATCAGTGAC
|
Marker sequence
AGGAGGATTCTGATGATTATAATTATACACTGTAAACACAGAAGCAGCTA
GCTCAGATATGGAAGATAGAAATTTAAGGACTTGGAAAGTTCATAGGCAT CTGGCGGGGATCTGATAAGGAAGGGCAGAGGAATCAGTGACGCTACTAAG AATAGATGGCCAAACAATTGAACCAAAAACAAGGAGAAGTGATTAACAGG AGCAGGAATTAAAAAGGTTGAAGTGGAAAATCAGCAATGATGGGAAATAG GTGAATGGAAAATAAAAAAACAGTGAATTAAATCGTACAGAGAATATAGG CTTCCTATTGCTTCTACTGAAAAAAATTAAAGGTGAAATTTACTTCATTT GGCTGCATTCTTCTTAAATAATATAATCTACTTCCTTAACTGAAGAACAC AACCCACTTGCAAGAATATCAGTACCTGAAGTTTGTTCTGTTCTCCAAAT ACATTTATAGAAGCACGTTGTAAATGAAGACAGAGAACCTGCAAGGTGGC ACAACAGTAAGCACATGCAAAAGAGTCAACAAATAAAACACATGAAAAAA CCATTAAATCACAGAGCGCTGAAGCATCAAGTATTAAAATTAAATCCTAT TTGCCCCAAGTGACATGTAAAATGTTACTCCTTGACGATCCCTTATTTTC CTCGTTTTATAATTTTGTTGGCAGCTATATGGT |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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