EST details — SGN-C173219

Search information 
Request: 173219Match: SGN-C173219
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C173219Clone name: TUS-15-J1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173219 is on microarray TOM1 spot ID 1-1-8.2.20.15 [Order] [Tomato Microarray Database]
See unigene SGN-U580537 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C1874 [cLEC-14-C4] Trace: SGN-T26243 EST: SGN-E204627 Direction: 5' Facility: TIGR
Clone: SGN-C173219 [TUS-15-J1] Trace: SGN-T188871 EST: SGN-E374641 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E374642Length: 761 bp (900 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E374642 [] (trimmed) CGAGCATCAATGTCGAGAATGTAGAATCAAACAGGAGGGCTCTCCGTGAGCTTCTCTTTTGCACCCCTGGTTGTCTTCAGTACCTTAGCGGTGTG
ATCTTGTTTGAGGAGACACTTTACCAGAAGACTGCTGCTGGCAAGCCTTTCGTTGAAGTCATGAAGGAAGCTGGAGTCCTTCCTGGTATTAAGGT
TGACAAGGGTACCGTTGAACTCCCCGGGACCGATGGTGAGACCACCACTCAAGGTCTTGATGGTCTCGCAGAACGTTGCCAGAAGTACTACGAGG
CTGGTGCTAGGTTCGCCAAATGGCGTGCTGTGTTGAAGATTGGTGCCAATGAGCCATCTCAGCTCGCCATCAATGATAACGCCAATGGCCTTGCC
AGATACGCCATTATTTGCCAGCAGAATGGTCTTGTACCCATTGTTGAGCCCGAGATCCTTGTCGATGGAGCCCATGACATTAAAAAGTGCGCTGA
TGTTACCGAGCGCGTTCTTGCTGCTTGCTACAAGGCTCTCAATGACCACCATGTCCTCCTTGAAGGTACCTTGTTGAAGCCTAACATGGTCACTC
CTGGTTCTGAATCTCCCAAGGTTGCACCAGAAGTGATCGCTGAGTACACCGTCCGTGCTTTGCAACGCACAATGCCACCCGCTGTTCCCGCTGTG
GTGTTCCTGTCTGGTGGTCAGAGTGAAGAGGAAGCCACCGTCAACCTCAACGCCATGAACAAGCTTCAAACCAAGAAGCCATGGTCGCTTTTCTT
T
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374642] SGN-U580537 Tomato 200607 Build 2 109 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188872 [Download][View] Facility Assigned ID: FA0AAD3CE01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.981 Expected Error Rate: 0.0016 Quality Trim Threshold: 14.5