Sol Genomics Network

Unigene SGN-U580537

Unigene Basic Information

Unigene ID:	SGN-U580537
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1376 bp

>SGN-U580537 Tomato 200607 #2 (109 members)
ATTGATTCTCTCTATAAACTTCTCTCACTTTCTTCAAATCTAAGCTTATTAATCATGTCTTGCTACAAGGGAAAGTATGCTGATGAGCTT
ATTAAGAATGCTACATACATTGGTACCCCTGGAAAGGGTATCCTTGCTGCTGATGAATCTACTGGAACCATTGGAAAGCGTCTCTCGAGC
ATCAATGTCGAGAATGTAGAATCAAACAGGAGGGCTCTCCGTGAGCTTCTCTTTTGCACCCCTGGTTGTCTTCAGTACCTTAGCGGTGTG
ATCTTGTTTGAGGAGACACTTTACCAGAAGACTGCTGCTGGCAAGCCTTTCGTTGAAGTCATGAAGGAAGCTGGAGTCCTTCCTGGTATT
AAGGTTGACAAGGGTACCGTTGAACTCCCCGGGACCGATGGTGAGACCACCACTCAAGGTCTTGATGGTCTCGCAGAACGTTGCCAGAAG
TACTACGAGGCTGGTGCTAGGTTCGCCAAATGGCGTGCTGTGTTGAAGATTGGTGCCAATGAGCCATCTCAGCTCGCCATCAATGATAAC
GCCAATGGCCTTGCCAGATACGCCATTATTTGCCAGCAGAATGGTCTTGTACCCATTGTTGAGCCCGAGATCCTTGTCGATGGAGCCCAT
GACATTAAAAAGTGCGCTGATGTTACCGAGCGCGTTCTTGCTGCTTGCTACAAGGCTCTCAATGACCACCATGTCCTCCTTGAAGGTACC
TTGTTGAAGCCTAACATGGTCACTCCTGGTTCTGAATCTCCCAAGGTTGCACCAGAAGTGATCGCTGAGTACACCGTCCGTGCTTTGCAA
CGCACAATGCCACCCGCTGTTCCCGCTGTGGTGTTCCTGTCTGGTGGTCAGAGTGAAGAGGAAGCCACCGTCAACCTCAACGCCATGAAC
AAGCTTCAAACCAAGAAGCCATGGTCGCTTTCCTTTTCCTTCGGACGTGCTCTTCAGCAGAGTACCCTCAAGGCATGGGGAGGAAAAGAA
GAGAATGTTCAGAAAGCACAAGCTGCATTCCTCACCAGGTGCAAGGCCAACTCCGAGGCTACACTCGGAAAGTACGCCGGAGCTTCTAAC
TTGAGCGAGGGCGCGTCCGAGAGCCTTCATGTTAAGGACTACAAGTACTAAGATCAACAAAGTTTTTAGTTTTATGTTTTCTCTTTGCTT
TCTGAGAATGTGACGATATGGTTTTACAAAAATGTCTTATATGTGGACATAATGTGTAAGGCTTCTTCTTTTTTTTTTTTCTATAATTTT
TCGTTTAATAAAAAACTTATGAGTAAACAATATTGGCTTTGTGACAATCTTCATGTAACAGTTTTTGGGATATGATTTATTAAATGGAAT
ATTATCTTTTGGGTTTTTTAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
AF332957	fructose-1,6-bisphosphate aldolase	fructose-1,6-bisphosphate aldolase

Genomic locations (0)

None

Library representation (31)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	13
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	7
Solanum lycopersicum	LA	Leaf Mature leaves	6589	4
Solanum lycopersicum	LE15	Fruit 15 days post anthesis	269	1
Solanum lycopersicum	LeMiToFr02	fruit	18697	2
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	4
Solanum lycopersicum	Sl_FruitQTL	late maturation (breaker and red ripe)	663	3
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	4
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	10
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	16
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	5
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	2
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	2
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	2
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	5
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	2
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	2
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	2
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	3
Solanum lycopersicum	cTSC	seed	2256	2
Solanum lycopersicum	cTSD	seed	1504	1
Solanum lycopersicum	t3_tus	Rearrayed collection of L. esculentum cDNA clones	1883	1
Solanum lycopersicum	vSlycmRNA		8362	1
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	6
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (109)

Alignment image suppressed for unigene with 109 aligned sequences.
[Show Image]

Markers Information (1)

Expression Data (3)

Annotations (manual: 1 | blast: 3 | go: 4 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (3)

Unigene	Build
SGN-U314331	Tomato 200607 #1
SGN-U314333	Tomato 200607 #1
SGN-U339184	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL: