EST details — SGN-E390801

Search information 
Request: 390801Match: SGN-E390801
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184343Clone name: TUS-44-I13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184343 is on microarray TOM1 spot ID 1-1-4.1.16.7 [Order] [Tomato Microarray Database]
See unigene SGN-U580537 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C15271 [cLED-11-H11] Trace: SGN-T51532 EST: SGN-E235522 Direction: 5' Facility: TIGR
Clone: SGN-C184343 [TUS-44-I13] Trace: SGN-T191895 EST: SGN-E390569 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E390801Length: 464 bp (895 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E390801 [] (trimmed) AAAAACCCAAAAGATAATATTCCATTTAATAAATCATATCCCAAAAACTGTTACATGAAGATTGTCACAAAGCCAATATTGTTTACTCATAAGTT
TTTTATTAAACGAAAAATTATAGAAAAAAAAAAAAGAAGAAGCCTTACACATTATGTCCACATATAAGACATTTTTGTAAAACCATATCGTCACA
TTCTCAGAAAGCAAAGAGAAAACATAAAACTAAAAACTTTGTTGATCTTAGTACTTGTAGTCCTTAACATGAAGGCTCTCGGACGCGCCCTCGCT
CAAGTTAGAAGCTCCGGCGTACTTTCCGAGTGTAGCCTCGGAGTTGGGCTTGCACCTGGTGAGGAATGCAGCTTGTGCTTTCTGAACATTCTCTT
CTTTTCCTCCCCATGCCTTGAGGGTACTCTGCTGAAAAGCACGTCTGAAGGGAAAGGAAAGCGACCATGGCTTGGGGGGGGGGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390801] SGN-U580537 Tomato 200607 Build 2 109 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192127 [Download][View] Facility Assigned ID: FA0AAD32AE07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.960 Expected Error Rate: 0.0080 Quality Trim Threshold: 14.5