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EST details — SGN-E397739

Search information 
Request: 397739Match: SGN-E397739
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185273Clone name: TUS-46-P7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185273 is on microarray TOM1 spot ID 1-1-2.4.12.16 [Order] [Tomato Microarray Database]
See unigene SGN-U582049 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C82221 [cLET-1-E23] Trace: SGN-T102359 EST: SGN-E292085 Direction: 3' Facility: TIGR
Clone: SGN-C82221 [cLET-1-E23] Trace: SGN-T102563 EST: SGN-E292289 Direction: 5' Facility: TIGR
Clone: SGN-C185273 [TUS-46-P7] Trace: SGN-T200113 EST: SGN-E398787 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E397739Length: 453 bp (854 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E397739 [] (trimmed) TTTGAAAATTTCTCCCTATATTTTTTTCCCTTCTACTGCTATGGGTTTGTCTCTGTTTCTCCACTTGCCCAACCTTGATGAAACGGTGTCGTGTG
AGTACAGAGACTTGCCTGACCCGATTCAGATTCCGGGTTGTACTCCGATCCACGGTAAGGATCTACTTGACCCGGTTCAAGACCGGAATGATGAA
TCCTATAAATGGCTTCTTCATCATGCGAAGAGGTATGGAATGGCAGAAGGGATAATAGTGAACAGTTTTAAGGAATTGGAAGGAGGAGCCATTGG
CGCTCTACAGAAGGATGAACCGGGTAAACCAACCGTTTACCCGGTTGGCCCGCTTATTCAGATGGATTCGGGTAGTAAGGTTGACGGGTCGGAGT
GTATGACGTGGCTGGATGAACAGCCGCGTGGCTCTGTGTTATACATATCGTACGGTAGTGGTGGGACCCTATC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397739] SGN-U582049 Tomato 200607 Build 2 59 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T199065 [Download][View] Facility Assigned ID: FA0AAD34CH04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.986 Expected Error Rate: 0.0034 Quality Trim Threshold: 14.5