SGN Gene Family 122613

Summary 
Family Number4207
Total Genes5
Build Date2007-08-28
i Value 2 (Normal stringency in grouping genes together)
Build5 [Details of the Overall Family Build]
AnnotationDNA topoisomerase, type IA;Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA topoisomerase type I activity (GO:0003917), Cellular Component: chromosome (GO:0005694), Biological Process: DNA topological change (GO:0006265), Biological Process: DNA unwinding during replication (GO:0006268); DNA topoisomerase, type IA, DNA-binding;Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA topoisomerase activity (GO:0003916), Cellular Component: chromosome (GO:0005694), Biological Process: DNA topological change (GO:0006265), Biological Process: DNA unwinding during replication (GO:0006268); TOPRIM;Molecular Function: nucleic acid binding (GO:0003676), Biological Process: DNA modification (GO:0006304); DNA topoisomerase, type IA, domain 2;Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA topoisomerase activity (GO:0003916), Cellular Component: chromosome (GO:0005694), Biological Process: DNA topological change (GO:0006265), Biological Process: DNA unwinding during replication (GO:0006268); DNA topoisomerase, type IA, central;Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA topoisomerase (ATP-hydrolyzing) activity (GO:0003918), Cellular Component: chromosome (GO:0005694), Biological Process: DNA topological change (GO:0006265), Biological Process: DNA unwinding during replication (GO:0006268); DNA topoisomerase I, bacterial-type;Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA topoisomerase type I activity (GO:0003917), Cellular Component: chromosome (GO:0005694), Biological Process: DNA topological change (GO:0006265), Biological Process: DNA unwinding during replication (GO:0006268); Toprim subdomain;Molecular Function: nucleic acid binding (GO:0003676), Biological Process: DNA modification (GO:0006304); DNA topoisomerase, type IA, zn finger;Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA topoisomerase (ATP-hydrolyzing) activity (GO:0003918), Cellular Component: chromosome (GO:0005694), Biological Process: DNA topological change (GO:0006265), Biological Process: DNA unwinding during replication (GO:0006268)
Data SetGene family for all current cgn unigene builds and the Arabidopsis proteome version 2004
Explanation of family analysis and terms used on this page
Relations to Other Builds 
Build idi ValueFamily Number (Size)
41.1 304(49) 
65 4934(4) 
Family Sequence Alignment 
Alignment not available for this family.
Family Members  
Organism# of MembersMember Id
Arabidopsis1At4G31210
Solanum tuberosum2SGN-U280061 SGN-U283796
Tomato 2006072SGN-U331290 SGN-U345411