Sol Genomics Network

Unigene SGN-U573160

Unigene Basic Information

Unigene ID:	SGN-U573160
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1486 bp

>SGN-U573160 Tomato 200607 #2 (38 members)
ATATTATTATTAATAACTTTTTATATTATTATTAATATCGGTATAATTCTAATCGTTTGACCAACTTAATTTAGTATTATTCAAAATTAA
TTCCCTCACCATCTTCCCACTTTCCTTTCTTCATCTTCTTCATTAATTAATAAAACTTTCCATTATAAAAACATATCAGGTCCCAAATCT
CAATACTCACAAAACAAAAAAAAATTCTCTCTTCTTCTCTAAATCTCTCAAAAATCATCTCTAATTCTTAGTTCAATCAAGTATGGCAGG
AACAAGTAATTATCCTCCTCAAACTCCGGCGCCTATGCCAGTACCAAATCCGGTAGCAATTATAAATCCACAGTTCTGTGCACCGTATCC
CGTTGATTTAAACGTTGTAAGGAAACTTATGACTTGGTCTGAAGGTGCGTTCGGAGTTACCGATGTCAATGGAAACATTGTTTTTAAGGT
TAAAGGCAAGTTCTTCAGCCTCCGTGATCGCCGGATTTTGCTTGATGCTGCCGGAAACTCTCTCGTCACTTTTCAACAAAAGATGTTGAG
TGCTCATAGAAGATGGCAAGTATACAGAGGAGAAAGCACAGACTCAAAAGATTTCCTTTTCAGTGTAAAAAAATCTTCACTTCTTCAATT
CAAAACCAAATTGGATGTATTCTTAGCGCACAACACATCAGAAGACGTTTGTGATTTCAGAATTGAAGGCAGTTGGCTTGAAAGATCATG
TGTTATATATGCTGGAAATTCGTCGTCTATAATTGCTCAAATGCACAGGAAACACACTGCTCAAAGTATACTACTTGGTAAAGACAATTT
TGGTGTCACTGTGTACCCAAACGTGGATTACGCGTTCATTGTTGCTCTCGTTGTGATTCTTGAGGAGATTAATGAGGATCGATCAGGTTC
AGATTAAGATAGTTATCGCGAGCATTGCCAGGTAGCTTGATGTGTATTTTGTTTTGAACCCCGCGTTTATGGCTATACTTTTGAGTCTAG
TTGATTGCCAGATTTGGCTAATGTTGTATAAGTGTGTAATGTTGGTTTGTTTGCAAGCTTGAGCTATGAACACTGTTATAGTATACAAGT
TTATTTTGGTAGCTGTACTGATGTTCCTTTTCTTCCTCTGTTTCAACTGCATTTTGGTCGTGCCTCAGTGATTTTGGTTTCACTGTGTGA
ACGGAACGTGGATTACGCCATTGTTGTTGCTCTGCTTGTGATTCTGGAAGGATTCATCAGGTGAAAGATCAAGATTGTAATCACGAGTCT
TGCTAGTAAATGATGTATATCTTGTTTGAGCTTAGTGTTTTAGCTTTACTTGGGAGTGTTTGATTGAAATATACGCCTAATATAGTATAA
CTGTATAAGCTATATTGGTCATACTTTTCAAAAAATGTTAACAATACGAGAATCCGATATGTGTGTAATGCTATATTGTTTGGAAGCTTT
CAGATAGATAATTATGAATTTGAATTTTATTTTCTTTTTGCAATTT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (17)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	2
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	Le2TR	roots 1-,2-,3-, and 4- month-old	1179	5
Solanum lycopersicum	LeMiToFr02	fruit	18697	7
Solanum lycopersicum	LeMiToLf01	leaf	30679	3
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	1
Solanum lycopersicum	Sl_RootInf02	root and collar Three weeks old	333	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	5
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	4
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOS	suspension cultures	8026	1

mRNA member sequences (38)

Alignment image suppressed for unigene with 38 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (2)

Annotations (manual: 1 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U316792	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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