Sol Genomics Network

Unigene SGN-U574419

Unigene Basic Information

Unigene ID:	SGN-U574419
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1808 bp

>SGN-U574419 Tomato 200607 #2 (44 members)
GGGCGATTGGCGGCCAATCGGCCGAATTGAGAGTCCCTCTTGCCGTGTTGAAAGAAAAGAAAAAAAAACAAAGCCCACGCGAAAGAACAA
GGAACCACAATAAGAGGGGCTCTCCCTCTACCATTTGGACTCATTCGTTTTGATCGCATCTCCTTCTCTCTCTCCCATAAAACCATTTAT
TAGGTGTTAAGCTACTACTAAAACATTAAAAAAAGAAGAAGATGAGTTTCTTAGGTGGAAACATGGTCATGTTGGTGTTCTTAATGGGTT
AAGGGTTGGCTTCTTCTTCTCCAACATAAAAGAAGAAAGATTCATTCTTTTCTCTCTATCAAGAATCAAATAAAGTCTTTGAATACTTGT
TGGTATTTCCATAGTTTGGGGCATCTTCTTCTCATTCATGCTGTTTCTGTGTTTGCCTTAATTAGGCCTTCCCTTCCTCCCCACTCTCTT
TTACCAATCAAAATCCCTTACTTCTATATATATACACACACACAGCTTACTTGTGTTTGATCATTCTTCAATGGCTGTTCAAGCTCAATA
CCCATCTAATGTTCACCTCTTTAACAGAGCTGTGCAAGAACGAAAGAACCCAATTGGCAACGATGAATATTCGTTGCAACCTCAACCTGC
TGGAGGATCAATTCTTGATCACACACAAATGCGATTCAATCCAGGAGCTGGCTCTTATCATCATCCGCCGTGTAAGAGAAGAAGAGAAGT
TAGCACCACCACTGCAATGAATCCGTCAATGCAATCTCAGCCGCAGCTGATTGATCTCACTCAGCTTCATACAAATCCAAATGTTGTCTC
CACCGGCCTCCGTTTAGCTTCTGGAGAACAGTTACAACACCATCAAAAGCAGCAACAACAAAACCAACACTCTCTTTCTCCTCAATCTTC
TCAATCATCAGCTTTCTATTCCATATTCACAGAAGACATGTCTACTATTATCAAACAACACCGCGATGAAATTGAACAATTCCTCCATGT
TCAGAGAGAACAATTAAGACGGACATTAGAGGATAAAAGGCGAGCACACTATCGTGCTCTGATTGGAACCGCCGAGGAATCAATGGCACG
GCAGCTGAAGGAAAAGGAAGCCGAGGTTGGAAAAGCGTTTCGGCGCAACGCCGAGCTAGAGGCGCGTGCAGCGCAGCTCAGTGCAGAGGC
GCAAGCCTGGCAGGCAAGGGCTAGAGCGGAGGAATTCACCGCAGCAACGCTACAGGCACAGCTGCAGCAGGCGATGATGAACGGCGGAGG
GTGCAATGCGAACCTCCCGGACGGAGACATCGCCGGCGCCGGAGAAGCTGAGGATGCTGAATCAGCTTACATCGATCCAGACCGAGTGGT
GGAGACAACCGGTCCGAGTTGCAAGGCATGCCGGAAGCGAGTAGCGTCGGTGGTGCTTTTGCCGTGCCGGCATTTGTGTGTGTGCACAGA
TTGTGACGCTGTGGTACAAGCATGTCCACTCTGTCTCTCCATTAGAAGCTCAAGTGTTGAAGTCTTCCTCTGTTAGAAAAGCCCAATCTT
TGGCCCATTTATTTAAAGCCCGGGCCCAAATATCATGAACTAAGTAAAAGATTTTCTAACTATTGTATTCATGCTACTTTTAAGTTTTAA
AGTAAAAAAAAATGAATATAAAAAGAATTGATTAAAAAAATTAAAAAATTACATATCTCTTTATTCAAAAGCTACTTCTTTTTTTTTTGG
CTTTATAGTCAAGACCCAAAATCTTTATTATTTTTTGGGGAGAGGTGAATGTGATGTACATTATGAAATGGAGAGGCCTTTTCCTTTTCT
GTTCCTTT

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
Solyc06g061020	Solyc06g061020

Genomic locations (0)

None

Library representation (14)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	2
Solanum lycopersicum	LeMiToFr02	fruit	18697	2
Solanum lycopersicum	LeMiToLf01	leaf	30679	3
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	5
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	2
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	7
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	13
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	4
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	t3_tus	Rearrayed collection of L. esculentum cDNA clones	1883	1
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (44)

Alignment image suppressed for unigene with 44 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (6)

Annotations (manual: 1 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (3)

Unigene	Build
SGN-U315584	Tomato 200607 #1
SGN-U315585	Tomato 200607 #1
SGN-U335223	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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