Sol Genomics Network

Unigene SGN-U581717

Unigene Basic Information

Unigene ID:	SGN-U581717
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1322 bp

>SGN-U581717 Tomato 200607 #2 (38 members)
GGCCAAAGTTCAACTATTGCCTTTGCTATTCATTTTCTTCCATTGATTAGATAACTTCTCAATCTCATCTCTGTGAACTGTGGAAGAGAA
AACTATGGCGACTTTCTCAAACATCGGTGCCATTTGCAAAGTTACATCAGCTCCTTCTCTTAGCAGCACTAGTAGTAGAGCTCTCTTTCC
TACGACTTTGCGCAGTTACAGTCATTCACAAGTCTCTCGCTCTCGTTCTTGCCGACTTTGTATTAAAAGCAGTTATGCCGAAGCTGTCAG
AGGGGATCCTAACTCGGATGCAATTGATGTTGTAGCAGATGTTAAGACTGAACGAATTGTAGTTATAGGAGGCAGCGGCTTTGTTGGCTC
TGCAATATGCAAGGCCGCAGTGTCAGAGGGTATAGAGGTCATAAGTCTGAGCAGATCAGGGCGTCCCTCTAAATCAGACTCATGGGTAGA
TCAAGTCACTTGGATAACAGGAGATGTTTTCTATGCAAACTGGGATGAAGTACTTATTGGGGCTACAGCAGTTGTTTCAACTTTAGGAGG
TTTTGGTTCTGATGAACAAATGCTTAGGATCAATGGTGAAGCTAATGTTGTGGCTGTCAATGCTGCTAAAGAATATGGGACCCCTAAGTT
CATATTGATTTCTGTGCATGATTACAATCTACCATCATTCCTCCAATCAAGTTACTTCATAGGGAAAAGAAAAGCAGAATCAGAAGTTCT
TTCCAAATTCCCTAGCTCAGGTGTGGTTCTTAGACCTGCCTTTATATATGGGAAGAGGAAGGTTGACGGCTTCGAGATCCCTCTAGATTT
GATTGGAGAACCTCTTGAAAAGTTATTACGTGCAACAGAGAGCTTCACTAAACCATTGAACTCGTTGCCAGCATCCGATTTAATTCTTGC
CCCTCCTGTTAGCGTGGACGACGTTGCTTATGCAGTGATAAATGCTGTTAAGGATGACGACTGTTTTGGCATTTTTACCATCAACCAAAT
CAAAGAAGCAGCAGCAGGGGTTAAGGTGTAAGATAAGGTCCACATCAAAAAGAAAAATGACATACATCTTGTAACAAAATTATATATGTA
GAACATGTATCATGTCATACAAAACTCTTGCTTATGATATCCATAGTATAATGGACCTTTTGATGCTAAAATAGCCTATTTTCATCCTGT
ATTTACTAGTAAGAAGAGCAAATCAATACTCCATCTTGCAAAACACCATGTGTTGGAAGTCTTGGAGATTGAAATTATAGCAGTGAATTG
AACCGCGCTTCGCGCGGACATAATTATTGTTAAAGTAGTTCTTTTAGAAGACTTAAGTAATC

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
Solyc08g076450	Solyc08g076450

Genomic locations (0)

None

Library representation (17)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	4
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	2
Solanum lycopersicum	LA	Leaf Mature leaves	6589	6
Solanum lycopersicum	LeMiToFr02	fruit	18697	2
Solanum lycopersicum	LeMiToLf01	leaf	30679	6
Solanum lycopersicum	LeTransC6	leaf 1.5-month old plants	150	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	1
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	2
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	2
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	3
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2

mRNA member sequences (38)

Alignment image suppressed for unigene with 38 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (3)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U316185	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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