Sol Genomics Network

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Unigene SGN-U633543

Unigene Basic Information

Unigene ID:	SGN-U633543
Unigene Build:	Coffee species #1
Date:	2010-04-19
Organism:	C.canephora C.arabica
Alternative ID:	none
mRNA sequence:	Length: 1250 bp

>SGN-U633543 Coffee species #1 (255 members)
GGAGAAGGGGCAGACAGATCGACCTCCTTCGAAACTAGCGGCCCTCTATCTCTCTCTGCTTCAAGGAAATCTTTTTCCCACTCGATTCCT
TCTGCCAGACTTTATCCAAGAGGTTTCCACATTCGGCAGTGTTGAGTGATCCGAGCAGAGATGGGGCTTACCTTCACTAAGCTGTTCAGC
AGGCTGTTTGCCAAGAAAGAGATGAGGATTCTGATGGTAGGTCTTGATGCTGCTGGTAAGACTACAATACTGTACAAGCTCAAGCTTGGA
GAAATTGTCACTACTATTCCTACCATTGGCTTTAATGTTGAAACTGTGGAGTATAAGAATATTAGCTTCACCGTGTGGGATGTTGGTGGC
CAGGACAAGATCCGTCCATTATGGAGGCACTACTTCCAAAACACACAGGGTCTTATATTTGTGGTGGATAGCAATGACAGGGACCGAGTT
GTTGAAGCTAGGGATGAGCTGCATAGGATGTTAAATGAGGATGAACTGCGAGATGCTGTGTTGCTAGTGTTTGCTAACAAGCAGGATCTG
CCCAATGCAATGAATGCTGCAGAAATTACTGACAAGCTTGGCCTCCATTCTCTCCGTCAGCGCCATTGGTACATCCAGAGCACTTGTGCT
ACCTCTGGGGAGGGCCTTTATGAAGGGCTGGATTGGCTTTCCAGCAACATTGCTAGCAAGGCATAAGGCAAGAAATCAATTTGTTCGCTT
GCTGCTTGGATAATTGTGGGATTCAAGGACTGATACTATCTTGCTTTATGTGAGACTGAAACATGGTAGTGACCATACTGTTTTGCCCAT
TTTTCATTCTGTATCGTAACTATGATGTAGCAGAAGTTGCTTTTAAAGCTCTTCTTTGGCTTGATTTTTAGCTGCTTGCTTTAAATGTAG
ATGCTTTGTTATCTCGTTTGAAACTTATAACTACTGTCATTCAACTTGCAAAGTGGTACGTGCCTCATCCAACTTGGAATTGACGAAAAC
CTGGACACATCCAAATGTTCCAATTGGCGGTGGGGGAGCCCCGTAACTTCATTTTCCCAATAGAGGACCATGCACAACTTGGAGGGGACC
TATATCAGAAAGATTTTGATGCTGCTGCTGAGATCAGTGGATCACAATTCTATTACATAAAGAATGAAGCTGTTCTGTTAAAAATGGGCC
TTGGTAACTGGGCAGTCTCAGAAGTAATGAAAAGAGGCTTTACACCTCCTCACAACACCAGAGATTGTCCGGTCCTCTGT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (22)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Coffea canephora	cccl	LeafB Young	11655	61
Coffea canephora	cccp	Pericarp All development stages combined	10473	14
Coffea canephora	cccs30w	Endosperm and perisperm 30 week after pollination	12592	20
Coffea canephora	cccs46w	Endosperm and perisperm 46 week after pollination	10903	24
Coffea canephora	cccwc22w	Whole Cherry 22 week after pollination	11656	65
Coffea canephora	irdccf	Cherry of different developmental stages	5089	5
Coffea canephora	irdccl	Young leaves	3693	2
Coffea arabica	Ca_AtMixTis1	Mixture of leaf, fruit, flower, root and calli Adult trees	10661	5
Coffea arabica	Ca_AtMixTis2	Mixture of leaves, flowers, fruits and meristems Adult trees	5111	1
Coffea arabica	Ca_CTFrHh		1006	2
Coffea arabica	Ca_CatYoLeaf1	Leaf young leaves	2851	4
Coffea arabica	Ca_DevFlow	Flower developed flowers	2568	9
Coffea arabica	Ca_FlowBud	Buds flower buds	1373	8
Coffea arabica	Ca_Fruit100d	Fruits Fruits with 100-115 developing days	1361	3
Coffea arabica	Ca_Fruit26d	Fruits fruits	1604	3
Coffea arabica	Ca_Fruit28d1	Fruits 28 weeks old fruits	1373	3
Coffea arabica	Ca_Fruit28d2	Fruit 28 weeks old fruits	1675	11
Coffea arabica	Ca_Fruit28d3	Fruits 28 weeks old fruits	1923	1
Coffea arabica	Ca_Fruit31d	Fruits 31 weeks old fruits	1808	7
Coffea arabica	Ca_FruitPar	parchment Fruit parchment	929	1
Coffea arabica	Ca_SecRoot	Roots Secondary roots	1383	4
Coffea arabica	vCaramRNA		516	2

mRNA member sequences (255)

Alignment image suppressed for unigene with 255 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (0)

None

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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