Sol Genomics Network

Unigene SGN-U280689

Unigene Basic Information

Unigene ID:	SGN-U280689
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	280689
mRNA sequence:	Length: 1290 bp

>SGN-U280689 Solanum tuberosum #4 (3 members)
TTTTTTTTTTTTTCATTGAGTAAAAAAGAAAAAAAGAGAAATAGTTATTTGGTGTTCTCTGGAGAGGATGAGTAACACTGCATATGGAAT
ATCTGAGCCAATTTCAACTGGTGGACCCTCTGAATTGGATGTTGTTAGAAACCGCGACCTGGAAAAGTTTCTTGCAGATGCAGGCTTATA
TGAAAGTCACGAAGAGGCCATTAAAAGGGAAGAAGTGCTAGGGAGATTAGACCAGATTGTGAAGACGTGGGTGAAAAATGTCTGTCGTGC
TAAAGGCTTCAATGATGACCTGGTGCATGAGGCAAATGCAAAAATCTTCACATTTGGTTCATATCGGCTTGGTGTACATGGCCCTGGTGC
TGATATAGACACACTATGTGTAGGACCTAGACATGCGATGCGTGAGGACTTCTTTGGTGAACTTCATAGAATGCTTGAAGAGATGCCTGA
AATACAAGAACTTCATCCTGTTCCTGACGCTCACGTTCCTGTTATGAAGTTCAAGTTCAATGGGGTTTCTATAGACCTTCTTTATGCGAA
TGTATCACTCTGGGTTATTCCTGAGGACTTGGATGTTTCTCAGGAGTCTATACTACAGAATGTGGATGATCAGACTGTTCGTAGTCTTAA
TGGATGCAGAGTAACAGATCAAGTTTTGCACTTAGTACCGAATATTCAGAGTTTCCGCACGGCACTGAGATGCATGAGATTGTGGGCAAA
ACGGCGTGGAGTTTACTCAAATGTTACCGGATTTCTAGGCGGTATAAATTGGGCACTGCTTGTTGCTAGGATTTGCCAGCTTTATCCTAA
TGCAGCTCCTAGCATGTTGGTCTCTCGGTTTTTCAGAGTCTACAGTTTGTGGCGCTGGCCAAACCCAGTTTTGCTGTGTCCAATAAATGA
AGGATCTCTAGGGCTGGCCTATTGGGATCCTCGGAGGAATTTCAAAGATAGGCAGCATCTAATGCCGATAATAACTCCAGCATACCCCTG
CATGAATTCGAGTTACAATGTTTCAACGAGTACCTTGCGTGTCATGATGGAAGAATTCCTTAGAGGGAATGAAATTTGTGAGGCAATAGA
AGCTAACAAAGCTAGCTGGGGAAGTCTATTTGAGCCTTTCCCTTTCTTTGAAGCCTATAAAAACTACTTGCGAATAGACATAGCTACAGA
AAGTGACGATGACATGAGGCAATGGAAAGGATGGGTTGAATCTAGGATACGCCTGCTTACTCTAAAGATTGAGAGAGACACAGTCGGTGT
ACTTCAGTGCCATCCACATCCGGGTGAATT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (3)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDC	Sprouting Tubers	5177	1
Solanum tuberosum	STM	mixed tissues	14805	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	1

mRNA member sequences (3)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	532	PAP_RNA_bind PAP_centr PAP_25A_core	34
2	22471	PAP_RNA_bind PAP_centr PAP_25A_core	28
5	56632	PAP_RNA_bind PAP_centr PAP_25A_core	28
1.1	101903	Poly(A) polymerase central region - Molecular Function: polynucleotide adenylyltransferase activity (GO:0004652) - Biological Process: transcription (GO:0006350) PAP/25A core - Molecular Function: nucleic acid binding (GO:0003676) Poly(A) polymerase C-terminal-like Poly(A) polymerase RNA-binding region - Molecular Function: polynucleotide adenylyltransferase activity (GO:0004652) - Biological Process: transcription (GO:0006350)	29
2	119025	Poly(A) polymerase RNA-binding region - Molecular Function: polynucleotide adenylyltransferase activity (GO:0004652) - Biological Process: transcription (GO:0006350) Poly(A) polymerase central region - Molecular Function: polynucleotide adenylyltransferase activity (GO:0004652) - Biological Process: transcription (GO:0006350) PAP/25A core - Molecular Function: nucleic acid binding (GO:0003676) Poly(A) polymerase C-terminal-like	22
5	129472	Poly(A) polymerase RNA-binding region - Molecular Function: polynucleotide adenylyltransferase activity (GO:0004652) - Biological Process: transcription (GO:0006350) Poly(A) polymerase central region - Molecular Function: polynucleotide adenylyltransferase activity (GO:0004652) - Biological Process: transcription (GO:0006350) PAP/25A core - Molecular Function: nucleic acid binding (GO:0003676) Poly(A) polymerase C-terminal-like	20

Preceding Unigenes (1)

Unigene	Build
SGN-U256953	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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