Sol Genomics Network

Notice: the solgenomics has been unstable, we apologize for the inconvenience.

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U584102 and SGN-U584104 in the current build, Tomato 200607 #2

Unigene SGN-U315531

Unigene Basic Information

Unigene ID:	SGN-U315531
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	315531
mRNA sequence:	Length: 2089 bp

>SGN-U315531 Tomato 200607 #1 (18 members)
AAAGCACCAATAAAATCCACTGCTTCCCTTCCCTCCTCTTCTCTCTCGATCGCCGGCGCACACTGACGAGTACTGAGACTAGCGTTTCTC
TAGGGTTCCGGCAAGTTATAGGATGGCGTCGGAGGATGTGGTAGGTAAGAGAAGCGAAAGTGCTGTTACTACAATCGTCAATCTGGCTGA
AGAAGCTAAAATGGCGAGCGAAGGTGTTAAAGCTCCGAGTCATGCTGCTATTTTCAGTGTATGCAAGTCTCTCGCTGCTGGTGGAATCGC
CGGTGGAGTGTCACGCACTGCAGTTGCTCCATTGGAAAGGCTTAAAATTCTGCTCCAGGTTCAGAATTCTCACAGTATAAAATACAATGG
AACAGTTCAGGGGTTGAAATATATATGGAGAACTGAGGGTCTCCGGGGCATGTTCAAAGGAAATGGTACTAATTGTGCCCGCATTGTTCC
AAACTCTGCTGTCAAGTTCTTCAGCTATGAGGAAGCATCCAAGGGAATCTTATGGTTTTACCGGCAGCAAACTGGAAATGAGGATGCTGA
ACTTACTCCTCTTCTACGCCTTGGTGCTGGAGCATGTGCTGGCATCATTGCAATGTCAGCAACTTACCCAATGGACTTGGTACGAGGCCG
AATTACTGTCCAGACAGATAAATCTCCTAGTCAGTACAGAGGGATATTTCATGCTCTTAGAACAGTTTTTGTTGAAGAAGGCCCGCGTGC
CCTGTACAAAGGATGGCTCCCTTCTGTAATAGGTGTTATTCCTTATGTAGGTTTAAACTTTGCTGTATATGAATCTTTAAAAGATTGGTT
GGTCAAAACTCGACCATTTGGACTAGCTCAAGACACTGAATTGAGTGTTATGACCAAGCTTGGTTGCGGTGCTGTTGCTGGAACCATTGG
ACAAACAGTTGCTTACCCTCTTGATGTCATTCGTCGAAGAATGCAGATGGGTGGCTGGAAAAATGCTGCTTCAGTTGTTATTGGTGATGG
GAAGACCAACGCACCTGTAGAGTATAGTGGTATGGTAGATGCATTCAGGAAAACAGTTCGTCATGAGGGAGTTGGAGCTTTATACAAGGG
TTTGGTCCCAAATTCAGTCAAGGTGGTCCCGTCTATAGCAATTGCATTTGTTTCATATGAGGTTGTAAAAGACATTCTTGGTGTGGAAAT
GAGGATATTTGATTGAATTGTTCGAGTAAAAACTCAGGTTATTTTCTGTACTTAGATGTTAATTTATTGGTAAGTGTTATCTTGTTGACT
TGGAAAAGGAGAGATCCTGAGCAGTGTTATGTATTTTATTGGAGAGATATATTAACAATAAAGAGTGGTCCAGAAGTAGCAGTAGGTGCA
CTTCACATTATAGGAATCAAAATCTACTCATTTGGCCAGTATTTTTACAGAAACGTTTATTTGAATAGAATTCTGGATCTGTTGATGTTC
ACCTCGTGCCGAATTCGGCACGAGGGTCGGATACATGGGTAGCTGAATACAGGAAGTGGATGGACAAAGTAGGGCACGGAATGCCTTATC
ATTTCGGTCACAGCACCATTTTCCTGCCTCAACAACCTGCTGTCGTTGAGCACGCCCCTGCTGGTTTCGTTGCCAATTTTTCAGCTGCTC
AGCCAGCTAAAGGAGGAATCGGTGGAATATATGCTCCGAACCCTGCCAACAGATACTTCAGACATGTTGTACATTGCAGGGATTGCAGCA
ATGTTGTTAAAGCTTTCGAGACTTGGAAAAAGGCCCTCTCTGTTATAGCTCTCGTGTCAACTGCATTCGCGATTCTAGTGTCTGGAAGAC
AATGGAAGGCCTTGCTTTTGCTTTCGACGTCGCTATGTTTAGCTGGTGCATATGCTTGTTCAACAGCCATTGCAATGAACACAACCAACT
TCATAAGGACTCACAGAAGATTGTAAAAAGTATGTATATAATAGCTATATTCATATTGATGTTTTTCATGTAAAATAGGATTCAGGTTTA
TGTGCTTTTCATACATATTGCTCCCTCCGTCCCAATTTATGTGACACTGTTTGATTTGACACTTAATAAGTGAATCTCATATTATCTCTG
CTAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (9)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	2
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	4
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cTOS	suspension cultures	8026	1
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	6
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (18)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 1 | blast: 2 | go: 5 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101398	Mitochondrial substrate carrier - Molecular Function: binding (GO:0005488) - Biological Process: transport (GO:0006810) - Cellular Component: membrane (GO:0016020)	297
2	118462	Mitochondrial substrate carrier - Molecular Function: binding (GO:0005488) - Biological Process: transport (GO:0006810) - Cellular Component: membrane (GO:0016020)	115
5	129509	Mitochondrial carrier protein - Molecular Function: binding (GO:0005488) - Cellular Component: mitochondrial inner membrane (GO:0005743) - Biological Process: transport (GO:0006810) Mitochondrial substrate carrier - Molecular Function: binding (GO:0005488) - Biological Process: transport (GO:0006810) - Cellular Component: membrane (GO:0016020)	19

Preceding Unigenes (2)

Unigene	Build
SGN-U217160	Lycopersicon Combined #3
SGN-U221676	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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