Sol Genomics Network

Unigene SGN-U582039

Unigene Basic Information

Unigene ID:	SGN-U582039
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1478 bp

>SGN-U582039 Tomato 200607 #2 (29 members)
GAATTGGTTCAGTAAAGGCGAGGCTCCGCCTCCCACCACCGTCTAATTTGTAAATATATTCGCCGGAAACTTCTCTATCCACGCTTTCTC
TATATCTATCATACCCTTTTTCTTAATTAATCGGTTGCTATTCCTTTGATGGCAGCGATTACGCAGAGAAAAGATTCGGATCGGATCAAA
GGTCCATGGAGTCCTGAAGAGGACGAGTTGTTGCAGACGCTTGTTGAGAAACATGGACCTAGAAACTGGACTTTGATAAGCAAATCGGTG
CCGGGTCGATCTGGTAAATCCTGTCGTCTCCGGTGGTGTAATCAGCTTTCACCTCAAGTGGAACATCGTGCTTTTACTCCTGAAGAAGAT
GATACGATCATCAGGGCTCATGCCAAGTTTGGTAATAAATGGGCGACTATTGCCCGTTTGTTATCGGGTCGGACTGATAACGCTATAAAG
AACCATTGGAACTCTACTCTTAAACGTAAGTGTCCTTCCATGTCCGAAGATTTAAGCTTTGAAACCCCTCAACCGCCTTTGAAAAGATCG
TCTAGTGTTGGTCCCTGTACCAATTTTTCTTCTGTTATGAATCCGGGTAGTCCGTCTGGATCCGACTTGAGTGATTCTAGTCTTTCGGGT
TTTCCCCAATCGCATGTTTACAGACCTGTTCCCCGTACCGGCGGGATTTTCCCTCTTCCTCCTCCTCCTCCGGTTAAGCAGATCGAAATT
CCTCCATCTGTACCCGACCCACCAACATCTCTCTGCCTTTCGTTACCCGGATCCGGATCCGGATCCATCGAAAAGCCAACACAGTCCCCT
AAATCACCACCACTACCACCGCCTCCTTTGCCGGCGGTTGATAAACCGATTCCCCCATCCGTACCCGTAACTTGTCCACCATCGGCTTTC
ATGGGTCATCTTGCTCAATCTAATCAAAGTTATGATTTTAGTGCTGCACCCAAATCAGGAGAGAAACAGTTTTTTACTCCAGAGTTCTTA
TCAGTTCTGCAAGATATGATTAGAAAGGAAGTTAAGAGTTACATGTCTGGGTTTGAACAAAATGGTCTCTGCATGCAGACTGATGCAATA
AGGAATGCAGTCATTAAGCGTATTGGCATCAGCAAGATTGAGTAATCCATCTATGATTACTGTTGAACTGTTCTATAGTCATCAACAATG
GCTGCCGCTGCTCAGCGAAATGACACCGGAGAAGAAACAATGGAAGATCGGAGCAGTCTTCCTCCCCCTTTTTTTTATTGCTTAATTACT
TCCTTAGAATTCCAATCAAAAAAAATAATTTTGCAGTAATGTACAGATGAATGAGAGGATGAGAGAAGAAAACTAAATTTAAAAATGCCC
GAAAAGATGAAAAAATTGAGAAAAATCTCATTCTCTTGTCTAATGTCGCATGATGATCTCGCTTCGATAGCGTTGCAAGAACAGGCTCAT
GAAAATTAATCTATGAATTAGGAAATTTTAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (15)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	2
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	3
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	Le2TR	roots 1-,2-,3-, and 4- month-old	1179	1
Solanum lycopersicum	LeMiToFr02	fruit	18697	6
Solanum lycopersicum	LeMiToLf01	leaf	30679	2
Solanum lycopersicum	Sl_RootInf01	root and collar Three weeks old	385	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	6
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1

mRNA member sequences (29)

Alignment image suppressed for unigene with 29 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (1)

Annotations (manual: 3 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U317935	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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