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Unigene SGN-U207119

Unigene Basic Information

Unigene ID:	SGN-U207119
Unigene Build:	Solanum melongena #2
Date:	2004-01-12
Organism:	S.melongena
Alternative ID:	207119
mRNA sequence:	Length: 442 bp

>SGN-U207119 Solanum melongena #2 (1 members)
TTTTTTTTTTTTTTTTTTTATAGNAAATCATCAGTAATTGAAACCAAAAACAGAATCTGTCTCATTTAACATCAAGGAAATTGTCATGAT
AACAGAAATTACAACATGTAAAGAGCCTTCATCTTATTTGAAAATGGTATAATAAGTAGCATATGTCACTCATATTTTATCCAAATAAAA
CCTGATCAGTGCTTGTGAAAATCTGGATCCTTAACAACAGTCACAGGGCAGGTGGCAACGGACAATACATAGTGGGTCACACTTCCCAAG
AATATCCTTTGGAGGGTACTGAGGCCTCTGCTGCCCATAACCAAACAATTCAACTTCAGATCTTCAACAGCTCCACACAGTTTCTCCCTA
GCATCTCCCCAGTATAATTTGACAACAACTTTTATCTCTTTCTGCCTAGTAGCAGTATCAAGCAAATCAAGAACTTCAATAT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum melongena	cSML	buds & flowers anthesis-stage flowers, 4-8 week old plants	4031	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E519915
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 2 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match	Score	E-value	Identity	Alignment Length	Frame
genbank	blastx	gi\|32352136\|dbj\|BAC78561.1\|	116.3	8.2e-26	75	228 bp (51.6%)	-3
Description:	gi\|32352136\|dbj\|BAC78561.1\| hypothetical protein [Oryza sativa (japonica cultivar-group)]
arabidopsis	blastx	At3g53990.1	110.5	3.2e-25	69.23	234 bp (52.9%)	-3
Description:	At3g53990.1 68410.m05519 expressed protein ER6 protein - Lycopersicon esculentum, EMBL:AF096262
swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on longest six frame method

>SGN-P209579 (84 Aa)

IEVLDLLDTATRQKEIKVVVKLYWGDAREKLCGAVEDLKLNCLVMGSRGLSTLQRIFLGSVTHYVLSVATCPVTVVKDPDFHKH

SignalP predicts non-secretion with a score of 0.049

No InterPro domain matches or not analyzed.

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P30653 (84 Aa)

IEVLDLLDTATRQKEIKVVVKLYWGDAREKLCGAVEDXEVELFGYGQQRPQYPPKDILGKCDPLVLSVATCPVTVVKDPDFHKH

SignalP predicts non-secretion with a score of 0.047

No InterPro domain matches or not analyzed.

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	108	Usp_dom	122
2	22696	Usp_dom	21
5	56841	Usp_dom	21
1.1	101498	UspA - Biological Process: response to stress (GO:0006950)	99
2	119416	UspA - Biological Process: response to stress (GO:0006950)	16
5	129832	UspA - Biological Process: response to stress (GO:0006950)	15

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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