Sol Genomics Network

This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been superseded by SGN-U567176 in the current build, Tomato 200607 #2

Unigene SGN-U213670

Unigene Basic Information

Unigene ID:	SGN-U213670
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	213670
mRNA sequence:	Length: 1264 bp

>SGN-U213670 Lycopersicon Combined #3 (60 members)
CAACAATACAATTTTCCTTCGATTTGCCTAATTCTCAGGTAATTTATCAAATTCTCTTGCTTTGATCTGCATGTATTTGATTTTTATCTG
TAAATTAATGTCCGCAACAATACAATTTTCCTTCGATTTGCCTAATTCTCAGGTCATCTTTCCAGCTCCACTTGGTTGTGTAGTGAATCT
TTTTCCAAGAAAACTTTTTATTTGGAGATGGCTGAGGACGGTCACAAGGTTATCTTAAACGTCTATGACTTGAGTCAAGGTTTAGCTCGA
CAGTTATCTACTACTTTTTTGGGAAAAGCTATTGAAGGAATATGGCACACAGGAGTAGTGGTTTATGGTCATGAATATTATTTTGGAGGC
GGTATACAACATGCTCCAGCTGGGACGACACCATATGGGACTCCTATTAAAGTTGTAGATCTGGGTGTCACCCACATACCAAAGGATGTC
TTTGAAATGTATTTGCAAGAGATAAGCCCTCGGTATACTGCAGAGACATACAGTTTGCTTACCCACAACTGCAACAATTTCAGCAATGAG
ATTGCTCAATTTTTGGTCGGTGCAACCATTCCAGAATATATTTTGAATCTTCCTAATGAGGTTACAAATAGCCCGATGGGTGCCCTTATA
ATGCCTATGATACAACAACTGGAATCAACGTTGAGGGCTAATGCAGTACCACAAGCACCCCAGTTCCGACCAGCTACTGTTGCTCCTGCT
TCCCAGCCGACACTTTCTGTTGGGAAGTCCTCTAGTAGCGGTATTAATCAATCCAAAAAGCCCGAGAGCCAAGATGGAGAGAAGAAGAAT
GTTAATGTGCCCTCTGCGGTCAAACCTGTGGAAGAGCAGGAGAAGACGCCTGCTAATGCGGTTGTGAAAGATCCTCTTGGTGATGCTCGG
AGCAAGGTACAAGAGGAAATCACCCGTGAATTTGCTGCAATCATGGCTACTGGGACATTGCGTGCAAGTGAGGCTGCTGCTTTAGCAACT
AAAAAAGTTATGCAAAGATATGGAGATACATTTGCTGCTATGAATTAATGACAACGAAGTTGTCTTTATAAATTCATCTGTATTGGAAAT
TTAATATCCAACTGATTTGATGTAAGGTAGACTTATTGGATGCTTAGTAGGAGATGAGCAAACATTCTTCCTTGAAAGAGATCCGCATTA
TTGTACTCTTTCTGGACTTCATACATTGAATAAGTTCACTTTTTACAACTAAAAAAAAAAAAAAAAAACTTGAGACTAAAAAAACCCGAG
ACTA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (11)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	6
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	8
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	5
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	28
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	2
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	4
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1

mRNA member sequences (60)

Alignment image suppressed for unigene with 60 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (6)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	137	DUF247	97
2	26306	DUF862	5
5	60292	DUF862	5

Preceding Unigenes (1)

Unigene	Build
SGN-U144135	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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