Sol Genomics Network

Unigene SGN-U269550

Unigene Basic Information

Unigene ID:	SGN-U269550
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	269550
mRNA sequence:	Length: 807 bp

>SGN-U269550 Solanum tuberosum #4 (28 members)
GTTGAGTTCCCTTATATAATTTTATTGTAAAGTTTGATCATCAATCATCATGAGTAGCTTTAGTGAAGAACAAGAAGCTTTGGTAGTTAA
ATCATGGGGGTCTATGAAGAAGGATGCTGGTGAATGGGGTCTCAAATTCTTTCTCAAGATATTTGAAATAGCACCATCGGCAAAAAAGAT
GTTCTCATTCCTCAAAGATTCAAATGTGCCATTGGATCAAAATCCTAAGCTCAAAGTTCATGCTAAATCTATCCTTGTCATGACTTGTGA
AGCAGCAGTTCAACTTAGAAAAGCTGGAAAGGTTGTGGTGAGGGATTCCACTCTAAAAAAAATAGGTGCTACACATTTCAAGTATGGTGT
GGCTGATGAGCATTTTGAGGTAACAAAATATGCCTTGTTGGAGACAATAAAAGAAGCAAGTCCAGAAATGTGGAGTGTTGACATGAAGAA
TGCATGGGGAGAGGCCTATGATCAATTGGTTAGTGCTATCAAGACTGAGATGAAGTAGCTAACCTTCAAAATCCAATAAAATAAATAAAT
TTACATCCTCTTGTATAACAACAACAATAACATTAGTCTCGTAAATGGGGTCTGAAATCGAGAATATAATGTATGCATATCTTATTTCTA
TTTTTTATGGAGTAGAAGGACTGATTCCGATGGACTATCGGCTCAAAATATTTTGTATTACTTTCAAAGTTTTGTAATCTAATTCGTGTG
CTATGTCTTTTGTATATATGTATGGATTATTTAGTTTTTGTATTTTTGTATACATTATCTAAGGAGTTAATTTGGTGTAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
AY151389	DTU-28 hemoglobin

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	IVROOT	Root	5850	4
Solanum tuberosum	STM	mixed tissues	14805	5
Solanum tuberosum	TUBS	Tubers	5976	1
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	17
Solanum tuberosum	vSTmRNA		708	1

mRNA member sequences (28)

Alignment image suppressed for unigene with 28 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 3 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1980	Leghaemoglobin Globin	9
2	24098	Leghaemoglobin Globin	9
5	58151	Leghaemoglobin Globin	9
1.1	103245	Leghaemoglobin - Molecular Function: oxygen binding (GO:0019825) Globin-like Globin - Molecular Function: binding (GO:0005488) - Biological Process: transport (GO:0006810) Globin-related - Biological Process: oxygen transport (GO:0015671) - Molecular Function: heme binding (GO:0020037)	7
2	121046	Globin - Molecular Function: binding (GO:0005488) - Biological Process: transport (GO:0006810) Globin-like Globin-related - Biological Process: oxygen transport (GO:0015671) - Molecular Function: heme binding (GO:0020037) Leghaemoglobin - Molecular Function: oxygen binding (GO:0019825)	7
5	131288	Globin - Molecular Function: binding (GO:0005488) - Biological Process: transport (GO:0006810) Globin-like Globin-related - Biological Process: oxygen transport (GO:0015671) - Molecular Function: heme binding (GO:0020037) Leghaemoglobin - Molecular Function: oxygen binding (GO:0019825)	7

Preceding Unigenes (1)

Unigene	Build
SGN-U244015	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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