Sol Genomics Network

Unigene SGN-U275471

Unigene Basic Information

Unigene ID:	SGN-U275471
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	275471
mRNA sequence:	Length: 836 bp

>SGN-U275471 Solanum tuberosum #4 (6 members)
GCGCTATGTCTCAACGTTTCTCTATTCACAGCGACTCTTCCCAAAAATTACACTCCTCTTATCCACTCCTACTGTAACTGCTCTTCCCCT
TCCTTTCCCGGCGATAATGGCCGTTTCCGGTTACGCGTCACCACTACTCGCCGGAGAAACAGCAAGTCGGAGATTTTTCTCGGCGACGAA
GAGGAAGTTGAAGCTGGAGAAAACGAGAAATTTTCCAGCATAGCTGAAGAAAACTCTAGGGCTATGAGAATGAGGAGGTCTAAAGGTGTT
GTAGACACAGAGGAAGAAGAAGAAGACGATTCGTCGATGTTGCTATCTCTGAGTATGAAACCAGACCGAAACATGGCTTTACTTGATGAT
TATGAAATGGAGGAGCTCGATTTTGTTCCTGAAAATCCTAATCATCGCAGTGGATATGTTGCTGTGCTTGGGAAGCCGAATGTTGGGAAA
AGTACACTTTCCAATCAAATGGTTGGGCAGAAACTGTCGATTGTGACTGATAAACCTCAAACTACTCGTCATCGAGTTCTTGGAATATGT
TCTGGTCCAGATCATCAGGTTTGGAATGTTTTTCTATCACTATGTTTCTGCTGAGCTGCAACATGTCTCAGTTTATTTTATGTCCGCATA
CTTCTTGGCTGACTCATGATGTGAAAATGTGGCTTACATAATGCTTTGTAGCTGCAGAGCTTCTTTTCTGGGGGAACTTCTGCTCTTATG
CTGCAAGTATCTTAACTTTGTTGTAGTACTGCTAGAGTCGAATAATGATTGCAACATAAGTTTCTTTCTTTGTGATTGCAATGGAAATTG
TTTTGTTAAGTAGTTGTGCCTAGTTT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (3)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	STM	mixed tissues	14805	3
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	2
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1

mRNA member sequences (6)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	184	MMR_HSR1	78
2	30508		2
5	65451		2
1.1	101549	GTP1/OBG - Molecular Function: GTP binding (GO:0005525) GTP-binding protein HSR1-related - Molecular Function: GTP binding (GO:0005525) - Cellular Component: intracellular (GO:0005622)	77
2	123943	GTP1/OBG - Molecular Function: GTP binding (GO:0005525) GTP-binding protein Era - Molecular Function: RNA binding (GO:0003723) - Molecular Function: GTP binding (GO:0005525) - Cellular Component: intracellular (GO:0005622) Small GTP-binding protein domain - Molecular Function: GTP binding (GO:0005525) KH type 2 - Molecular Function: nucleic acid binding (GO:0003676) GTP-binding protein HSR1-related - Molecular Function: GTP binding (GO:0005525) - Cellular Component: intracellular (GO:0005622)	4
5	134105	GTP1/OBG - Molecular Function: GTP binding (GO:0005525) GTP-binding protein Era - Molecular Function: RNA binding (GO:0003723) - Molecular Function: GTP binding (GO:0005525) - Cellular Component: intracellular (GO:0005622) Small GTP-binding protein domain - Molecular Function: GTP binding (GO:0005525) KH type 2 - Molecular Function: nucleic acid binding (GO:0003676) GTP-binding protein HSR1-related - Molecular Function: GTP binding (GO:0005525) - Cellular Component: intracellular (GO:0005622)	4

Preceding Unigenes (1)

Unigene	Build
SGN-U248069	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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