Sol Genomics Network

Unigene SGN-U282913

Unigene Basic Information

Unigene ID:	SGN-U282913
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	282913
mRNA sequence:	Length: 559 bp

>SGN-U282913 Solanum tuberosum #4 (2 members)
CCGAGTCAAGGCTTTCAAAGCATTATTATCAGCTACACCTTCCAATTATCAACTATCTGCTCTTGGGGAGTTAATGTATCAGTGCCATTT
CAGCTACAGTGCTTGTGGTCTTGCATCAAATGGGACAGATAGGCTGGTTAACTTGGTACAAGAAATGCAGCACTCTAAATCATCAGAATC
TGAAGGTGGGACTTTATTTGGGGCAAAGATAACAGGTGGAGGTTCCGGTGGAACTGTTTGTGTTATCGGGAGGAACTGTTTAAGAAGCAA
TGAACAACTTGTTGAGATTCAGCAAAGATACAAAGCTGCCACTGGATTCTCACCATATGTGTTTGAAGGTTCTTCGCCTGGAGCTGCAAA
ATTCGGTCATCTCCAAATACGCCTTCTAAAGAGTTGAAGGCAAAGTGTAGGAGTTCTAGCACTGGAAACGTTTGCACAACACAAAACATT
GAGCTCGATGTATCAATGATTTTTCATTTTTCTGAAACAATATTTGCTTAGACGTTGATCATAAAGTAATGTTTATGCAACAACTCAATC
TTATAATTTTGATCAAGTA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (2)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	STM	mixed tissues	14805	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1

mRNA member sequences (2)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	882	GHMP_kinase Mev_gal_kin Galactokinase Mev_galkinase	21
2	23586	GHMP_kinase Mev_gal_kin Galactokinase Mev_galkinase	12
5	57661	GHMP_kinase Mev_gal_kin Galactokinase Mev_galkinase	12
1.1	102215	GHMP kinase - Molecular Function: ATP binding (GO:0005524) - Molecular Function: kinase activity (GO:0016301) - Biological Process: phosphorylation (GO:0016310) Galactokinase - Molecular Function: galactokinase activity (GO:0004335) - Molecular Function: ATP binding (GO:0005524) - Biological Process: galactose metabolism (GO:0006012) - Biological Process: carbohydrate phosphorylation (GO:0046835) Mevalonate and galactokinase - Molecular Function: ATP binding (GO:0005524) - Cellular Component: cytoplasm (GO:0005737) - Biological Process: metabolism (GO:0008152) - Molecular Function: kinase activity (GO:0016301) - Molecular Function: phosphotransferase activity alcohol group as acceptor (GO:0016773) GHMP kinase C terminal	19
2	119853	Galactokinase glycosyltransferase N-terminal GHMP kinase C terminal Galactokinase - Molecular Function: galactokinase activity (GO:0004335) - Molecular Function: ATP binding (GO:0005524) - Biological Process: galactose metabolism (GO:0006012) - Biological Process: carbohydrate phosphorylation (GO:0046835) Mevalonate and galactokinase - Molecular Function: ATP binding (GO:0005524) - Cellular Component: cytoplasm (GO:0005737) - Biological Process: metabolism (GO:0008152) - Molecular Function: kinase activity (GO:0016301) - Molecular Function: phosphotransferase activity alcohol group as acceptor (GO:0016773) GHMP kinase - Molecular Function: ATP binding (GO:0005524) - Molecular Function: kinase activity (GO:0016301) - Biological Process: phosphorylation (GO:0016310)	12
5	130177	Galactokinase glycosyltransferase N-terminal GHMP kinase C terminal Galactokinase - Molecular Function: galactokinase activity (GO:0004335) - Molecular Function: ATP binding (GO:0005524) - Biological Process: galactose metabolism (GO:0006012) - Biological Process: carbohydrate phosphorylation (GO:0046835) Mevalonate and galactokinase - Molecular Function: ATP binding (GO:0005524) - Cellular Component: cytoplasm (GO:0005737) - Biological Process: metabolism (GO:0008152) - Molecular Function: kinase activity (GO:0016301) - Molecular Function: phosphotransferase activity alcohol group as acceptor (GO:0016773) GHMP kinase - Molecular Function: ATP binding (GO:0005524) - Molecular Function: kinase activity (GO:0016301) - Biological Process: phosphorylation (GO:0016310)	12

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (1)

Unigene	Build
SGN-U256226	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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