Sol Genomics Network

Unigene SGN-U285328

Unigene Basic Information

Unigene ID:	SGN-U285328
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	285328
mRNA sequence:	Length: 652 bp

>SGN-U285328 Solanum tuberosum #4 (2 members)
GGATCTTGATGGTGAATCTGTTGATGGGAAGGACCTGTTCCTTGCTGAAGTTGAATCTCGTGCATCCATACCACCACTGGAGGTCCCACT
TGATGATACAGAAAATTTGGATATGGGAGATGTATTTAATCAAAACTCAGGTGATGCTACCAATTTCGGTACTTCAGACGACAAGAACCA
GAAACATGTAGCAAAAAAAGCTAAAAGATTGAGGGAACAAGAAATTAGAGCTGCTGAGGAAAGATTACTGGAAAAAGATATTCCCAGGGA
TGAAGATGAGTTTGAGAAATTAGTTAGAAGTTCCCCAAATAGCAGCTTTGTCTGGATAAAATACATGGCATTTGTGCTGTCTTTGGCTGA
TGTTGAGAAGGCACGATCGATTGCAGAACGGGCTTTGAGGACAATAAACGTGCGAGAAGAGTTGGAAAAGCTGAATGTTTGGGTTGCCTA
CTTCAATTTAGAAAACGAGTATGGAAATCCCCCAGAGGAAGCTGTTGCAAAAGTATTCCAAAGAGCATTGCAGTATTGTGATCCCAAAAA
AGTGCATTTTGCCTTGTTAGGAATGTATGAGAGGACTGAGCAACACAAACTCACAGATGAACTTCTTAACAAGTTGGTTAAGAAGTTCAA
GCATTCGTGCAAGGTTTGGCTT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (2)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	STM	mixed tissues	14805	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (2)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	377	HAT	45
2	24950	ETC_CI_29_9 Ribosomal_S1 Kunitz_legume CitF PPR ATPase_a/bN LRR SurE S1 Polycystin_cat Acolac_synthsm	7
5	62327		3
1.1	101422	Agenet - Molecular Function: RNA binding (GO:0003723)	208
2	121714	RNA-processing protein HAT helix - Cellular Component: intracellular (GO:0005622) - Biological Process: RNA processing (GO:0006396) Suppressor of forked - Cellular Component: nucleus (GO:0005634) - Biological Process: mRNA processing (GO:0006397) RNA binding S1 - Molecular Function: RNA binding (GO:0003723) Tetratricopeptide-like helical - Molecular Function: binding (GO:0005488) Nucleic acid-binding OB-fold - Molecular Function: nucleic acid binding (GO:0003676) Nucleic acid-binding OB-fold subgroup	6
5	132626	RNA-processing protein HAT helix - Cellular Component: intracellular (GO:0005622) - Biological Process: RNA processing (GO:0006396) Suppressor of forked - Cellular Component: nucleus (GO:0005634) - Biological Process: mRNA processing (GO:0006397) RNA binding S1 - Molecular Function: RNA binding (GO:0003723) Tetratricopeptide-like helical - Molecular Function: binding (GO:0005488) Nucleic acid-binding OB-fold - Molecular Function: nucleic acid binding (GO:0003676) Nucleic acid-binding OB-fold subgroup	5

Preceding Unigenes (1)

Unigene	Build
SGN-U256677	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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