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Unigene SGN-U286485

Unigene Basic Information

Unigene ID:	SGN-U286485
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	286485
mRNA sequence:	Length: 385 bp

>SGN-U286485 Solanum tuberosum #4 (2 members)
GTGATTCTTGATCTTTTTAGCTCTTTCAACTCTGTGCTGGCAAGTAAAGGAGTGCAAGGAAGCACGAGGTTCGAGACACCATTGAAGCCA
TGTTGTATGGGAATAAGCAACAAATATTCATGTGGAAGTATGAATGTTAAAGGTGAAAAGATGTATACAGTGTGCAATGATCCAAAATCT
GCATTTTTTTGGGACACAGTTCATCCAACTGAAGCTGGATGGCATGCTGTTTATACTAACTTGAAATCTACTCTCACTCAAAAAATCCTT
TAGTTTATTAATTGTTTTTATTTATTTTATTTTATTTCTAGTTGTGTTAATTAAATCAGTGTGCTCTAGTGTTTTTATTAAATGTAATGT
AATTTCTAGATTTGTAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	TUBS	Tubers	5976	2

mRNA member sequences (2)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 3 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match	Score	E-value	Identity	Alignment Length	Frame
genbank	blastx	gi\|225440948\|ref\|XP_002283113.1\|	125	2e-27	63.64	261 bp (67.8%)	2
Description:	PREDICTED: hypothetical protein [Vitis vinifera] >gi270243326\|emb\|CBI30266.1\| unnamed protein p…
arabidopsis	blastx	At5G03610.1	118	1e-27	54.95	270 bp (70.1%)	2
Description:	GDSL-motif lipase/hydrolase family protein \| chr5:915649-918325 FORWARD
swissprot	blastx	Q9LZS7	118	1e-26	54.95	270 bp (70.1%)	2
Description:	GDSL esterase/lipase At5g03610 OS=Arabidopsis thaliana GN=At5g03610 PE=2 SV=1

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on longest six frame method

>SGN-P228494 (90 Aa)

VILDLFSSFNSVLASKGVQGSTRFETPLKPCCMGISNKYSCGSMNVKGEKMYTVCNDPKSAFFWDTVHPTEAGWHAVYTNLKSTLTQKIL

SignalP predicts non-secretion with a score of 0.359

No InterPro domain matches or not analyzed.

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P88982 (90 Aa)

VILDLFSSFNSVLASKGVQGSTRFETPLKPCCMGISNKYSCGSMNVKGEKMYTVCNDPKSAFFWDTVHPTEAGWHAVYTNLKSTLTQKIL

SignalP predicts non-secretion with a score of 0.359

No InterPro domain matches or not analyzed.

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	33	Lipase_GDSL	287
2	28378	Lipase_GDSL	3
5	57654	Lipase_GDSL	12
1.1	101406	Lipolytic enzyme G-D-S-L - Biological Process: lipid metabolism (GO:0006629) - Molecular Function: hydrolase activity acting on ester bonds (GO:0016788)	261
2	124951	Lipolytic enzyme G-D-S-L - Biological Process: lipid metabolism (GO:0006629) - Molecular Function: hydrolase activity acting on ester bonds (GO:0016788)	3
5	130294	Lipolytic enzyme G-D-S-L - Biological Process: lipid metabolism (GO:0006629) - Molecular Function: hydrolase activity acting on ester bonds (GO:0016788)	11

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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