Sol Genomics Network

Unigene SGN-U292140

Unigene Basic Information

Unigene ID:	SGN-U292140
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	292140
mRNA sequence:	Length: 663 bp

>SGN-U292140 Solanum tuberosum #4 (1 members)
ACTAGTCTCGAGTTTTTTTTTTTTTTTTTTTTATATACAATTTTCCCTATATAATATCACAAGTAAATTATGTGTACACAATCTTGTCTT
GTGAAAACATAAAAAGCTCTTTTCAAAAAACATCCGGCTCAAATAAAATGCTTCACACTGAACATAATGATAAAATGCATACAGATCTCT
AAATACATATCAAACCAAAGTCACAAATCAAGAACCATTATTATTATGATGAGTTTCGACTAGACAAAGCAAACTTCAGGGCTGCAGCAG
TTGCATCTGACTTGATAGTAGTTTGTATGTGTGTATATATATATTTATGATTTCTAGTTGGGGGTTGGGGTTACTACTCTTAGCAGTAAT
CTAACCCCTCTACTACTCATACTAATTAAATTCTCTATTTATTTTATTCATAAACATCAAACTTGTAAATCCAAAGGAAATTACTAAATC
AAAAGGGAGAAGCTAATTTACTCTGCTCCAACCTCAAAACACATTCATCAACTTCACCTCAGTTACAAACCTTGCTGCTTTCTCCGGCCG
CCGAAGACATTTTCATCCAAGGACCATTGTAGTCCACAGTAGTTTTCATCATTTTACCACGTCCCCCACAAGTATCAATATTCTCATNCG
GACCCCTTTTCTTCTTCTTTTCTTTCAGCAACA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E444080
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	4525		3
2	28396		3
5	62777		3
1.1	101510	HSF/ETS DNA-binding - Molecular Function: DNA binding (GO:0003677) - Cellular Component: nucleus (GO:0005634) Winged helix repressor DNA-binding Heat shock factor (HSF)-type DNA-binding - Molecular Function: transcription factor activity (GO:0003700) - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565)	95
2	118501	HSF/ETS DNA-binding - Molecular Function: DNA binding (GO:0003677) - Cellular Component: nucleus (GO:0005634) Winged helix repressor DNA-binding Heat shock factor (HSF)-type DNA-binding - Molecular Function: transcription factor activity (GO:0003700) - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565)	77
5	134296		4

Preceding Unigenes (1)

Unigene	Build
SGN-U263946	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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