Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U578796 in the current build, Tomato 200607 #2

Unigene SGN-U312582

Unigene Basic Information

Unigene ID:	SGN-U312582
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	312582
mRNA sequence:	Length: 2253 bp

>SGN-U312582 Tomato 200607 #1 (27 members)
AACAGTTGAACAAACCTCCTGCTTCGATATTCACGAGGCAAGGCCCCTCCCCCCCTCTCTCTCTTTGTCATCTCCGCCAACCATAGCGGC
GATTTCTTCAAAGTCCCAACACTCTCAGCTTTCGGTTTTTATTACTCTCTCGCTCTTCATTTCCTCACACATTTTTCTCGCTCTATAATT
CTCTGTTCATTTTCCAGAAAATGGCTCAAGTGGTGGCTACTCGTTCGATTCAATCTTCATTCTCCAGCCCTAGCCATGGATCTCTGCAGA
GTCAAGTTGAGAAGCTTAAGCCTCCTAGCTTAGCCTCAAAAGTGCTAGGAAGGAATGAACGGAGCAATAGTTGTAGAGCTGTTCGTGTTA
ATATGCCGCAGATCATTGCTAGGAGATCTACGCGTGCCGAGCCTCAAGTTCTCCCTGTTTCTCCTGAAGATGTTCCAAAGAGTGAGGAGC
AAGAGCAGTATCTTCAGGCAATTCAGCAACTTGGTGACACTTCAGTGGGCATGTGGTCTAAACCTACTGTAAGACGTAAGACCAAGATAG
TATGCACAATCGGTCCCTCTACAAACACAAGAGAAATGATATGGAAACTGGCTGAAGCTGGAATGAATGTTGCCCGGATGAATATGTCTC
ATGGAGACCATGCATCCCACCAGAAAGTCATTGATTTGGTTAAGGAGTATAATGCACAGTCTAAGGACAATGTCATCGCCATCATGCTTG
ACACAAAGGGTCCTGAGGTTAGAAGTGGTGACTTGCCCCAGCCAATCATGTTGAAACCTGGACAGGAATTCACTTTCACAATTCAGAGAG
GGGTTGGCACAGCCGACTGTGTCAGTGTCAACTATGATGACTTTGTAAATGATGTTGAAGTAGGAGACATGCTTCTTGTTGATGGTGGCA
TGATGTCTTTACAGGTGAAATCCAAGACAGAAGAATCTGTGAAGTGTGAAGTTATTGATGGAGGGGAGCTTAAGTCGAGGAGACATCTAA
ATGTTCGAGGCAAAAGTGCCACACTTCCCTCTATTACTGAAAAGGACTGGGATGATATCAAGTTTGGAGTAGACAATAACATTGACTTTT
ATGCTGTTTCCTTCGTCAAAGATGCAGCAGTGGTTCATGAGCTGAAGAATTATTTGAAGAGTTGTGGTGCAGATATTCATGTTATTGTGA
AAATTGAGAGTGCAGACTCCATCCCAAATTTGCATTCAATAATTACTGCATCAGATGGGGCGATGGTTGCAAGAGGAGATCTTGGAGCAG
AGCTGCCTATCGAGGAGGTTCCTTTGTTGCAGGAAGAAATCATCAATATTTGCCGAAGTATGGGAAAAGCTGTCATCGTTGCCACCAACA
TGCTGGAAAGCATGATTGTCCATCCCACCCCAACTCGAGCAGAAGTATCAGATATTGCGATTGCTGTTAGAGAGGGTGCTGATGCTGTTA
TGCTTTCTGGAGAAACAGCTCACGGAAAGTTTCCCTTGAAAGCTGTCAAAGTTATGCATACCGTGTCACTACGAACTGAGGCTACTATTG
TTGGTGGTGAAACCCCTGCAAATCTAGGCCAAGCCTTCAAGAACCATATGAGCGAGATGTTCGCTTTCCATGCAACTATGATGTCCAACA
CTCTTGGAACCTCAATTGTTGTCTTCACTAGAACTGGTTTCATGGCAATCTTATTGAGCCATTATCGTCCTTCTGGCACTATATTTGCTT
TTACAAATGATAAGAAAATTCAACAGAGACTGGCTTCGTACCAAGGCGTATGCCCAATATATATGGAGTTCTTAGATTGCGCAGAGGAGA
CTTTCACTAGTGCATTGTCCTTGTTGCAGAAGCAAGGGATGGTAAAGGAAGGGGAGCAAGTAGCTCTTGTTCAGAGTGGCAGGCAGCCAA
TCTGGCGGCTCCAATCCACTCACAATATCCAGGTCAGGAAAGTTTAGACAGATGAAAAAACTGGAACCAGCTTAAGATCCACTCCTTTGT
AGTTGGGAGTTATTATTAGTGTTGGGCACTTGACGCTTCTGCCATCAAATAGGAATAGATATCATTCGCCAGTGTTACCGAGAGTTGTTC
TTGCAGGATTGCTAGGGTGTTATATTTACTGTTATTTGCTACGTGCTTCTGTATGTTTTGGCCTTAGACATCAAGTCAATGAAGCCGGCA
CTTGAATGCGTTGTTGTTTGAGAAGATTATGGAGTGAATCGTTGTTCTTCCGGAACAAATGTAATGAAGAAGAATCTAAGTTGAAAAAAA
AAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (14)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	3
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	3
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	3
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	3
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	5
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum lycopersicum	vSlycmRNA		8362	1
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	1
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (27)

Alignment image suppressed for unigene with 27 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 3 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101562	Pyruvate kinase beta-barrel-like - Molecular Function: transferase activity transferring phosphorus-containing groups (GO:0016772) Pyruvate kinase - Molecular Function: pyruvate kinase activity (GO:0004743) - Biological Process: glycolysis (GO:0006096)	73
2	118514	Pyruvate kinase beta-barrel-like - Molecular Function: transferase activity transferring phosphorus-containing groups (GO:0016772) Pyruvate kinase - Molecular Function: pyruvate kinase activity (GO:0004743) - Biological Process: glycolysis (GO:0006096)	71
5	130250	Pyruvate kinase beta-barrel-like - Molecular Function: transferase activity transferring phosphorus-containing groups (GO:0016772) Pyruvate kinase - Molecular Function: pyruvate kinase activity (GO:0004743) - Biological Process: glycolysis (GO:0006096)	11

Preceding Unigenes (2)

Unigene	Build
SGN-U215984	Lycopersicon Combined #3
SGN-U224350	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL: