Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U581270 in the current build, Tomato 200607 #2

Unigene SGN-U312856

Unigene Basic Information

Unigene ID:	SGN-U312856
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	312856
mRNA sequence:	Length: 2065 bp

>SGN-U312856 Tomato 200607 #1 (63 members)
GAATTGGCGGCCAATCGGCCGAATTGATAAAGCAAAATAGAATCTTGAACACTTGTTCTTCTTCTAAATTGAATAGCTTGTTCTGATTTT
TTTTGGTCAAAATGTTTATTGAAAATTTTAAGGTGGAAAGCCCAAATGTGAAGTATATTGAGAATGAAATTCATTCTGTGTATGATTATG
AAACCACAGAGCTTGTTCATGAAGAGAGAAATGGAACTTATCAATGGATTGTTAAGCCTAAAACTGTCAAATATGAATTTAAAACTGATA
CCCATGTGCCAAAATTGGGGGTTATGCTTGTTGGATGGGGAGGAAACAATGGTTCAACATTGACTGGAGGTGTTATTGCGAATCGAGAAG
GAATTTCATGGGCAACGAAAGAAAAAGTGCAACAAGCCAATTATTTTGGGTCTCTTACTCAGGCATCAACCATTCGAGTTGGGTCTTTCA
ATGGCGAAGAGATCTATGCACCCTTCAAAAGCCTCCTTCCCATGGTCAACCCAGACGATGTAGTATTTGGAGGATGGGACATTAGCAACA
TGAATTTGGCAGATGCTATGGTCAGGGCTAAGGTTTTCGAAGTTGATCTGCAAAAGCAGCTGAGGCCCTACATGGAATCCATGGTTCCCC
TTCCTGGTATCTATGACCCTGACTTCATTGCGGCTAACCAAGAAGCACGTGCCAACAACGTGATCAAAGGAACCAAGAAAGAACAAGTTG
AACAAATTGTTAAAGATATTAGGGAGTTCAAGGAGAAGAACAAGGTAGACAAGATAGTGGTTCTATGGACTGCCAACACCGAAAGGTACA
GTAATGTGGTTGTTGGCCTTAATGACACCATGGAAAACCTTTTAGCTGCTGTGGATAGAAATGAGGCTGAAATATCTCCTTCTACATTGC
ATGCTATTGCTTGTATTATGGAAAATGTGCCTTTCATCAACGGAAGCCCTCAAAACACTTTTGTTCCAGGTCTTATTGATTTGGCCATAA
AGAGAAACACTTTAATTGGTGGTGATGACTTTAAGAGTGGTCAAACCAAGATGAAGTCCGTGTTGGTTGATTTCCTTGTTGGAGCCGGTA
TTAAGCCAACGTCAATAGTGAGCTACAATCACTTGGGTAACAATGATGGAATGAATCTTTCTGCTCCTCAAACCTTCCGGTCTAAGGAGA
TCTCAAAAAGTAATGTTGTTGATGACATGGTTGCTAGCAACGCCATTCTCTATGAATCTGGCGAGCACCCTGACCATGTTGTCGTGATCA
AGTATGTTCCATATGTTGGAGACAGCAAGAGGGCAATGGATGAGTACATGTCAGAGATTTTCATGGGCGGAAAGAGCACTATAGTTATGC
ACAACACTTGTGAGGACTCTCTTTTGGCAGCTCCAATTATCTTGGATTTGGTCCTTCTCGCTGAACTCAGCACTCGCATTCAGCTCAAAG
CTGAAGGGGAGGGGAAGTTCCACTCCTTCCACCCTGTGGCTACTATTCTCAGCTACCTCACCAAGGCTCCCCTGGTACCACCAGGTACTC
CAGTGGTGAATGCCCTTTCAAAGCAGAGGGCAATGCTTGAGAATATAATGAGAGCTTGTGTTGGTTTGGCACCAGAGAACAACATGATTT
TGGAATACAAATGAAAAATATATATGCAGATGAAGAAAAATTACTAGAAGAGAATGGACTTAACTCAAGTGTAGTTGCATTTGTAGAAAA
GATCATTCTCTATTTAATTTTTTTTTTGTCCCTATTATATCTTATATTTTGTTTCCATTTTCTCATCATATAATTAAGTTAAGTGTGGCA
TGATTGTGAAGTGTAGGAGAGCTTAAAAGGGCCAAAGTCTTATTCATTGCAACTTCTTCTCTTCATGTTTTTGGCCCTCTTATCTCCAAA
TTGTATGTTGGTTGCTTTAGCTCAGATAGAGCCAGCAATATCTTGTTTCTATTGGAAAAAAAAATATAACATGGTGATTTAAATTTTGTT
TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
ins1p	putative myo-inositol-1-phosphatase	myo-inositol-1-phosphatase

Genomic locations (0)

None

Library representation (16)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	6
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	7
Solanum lycopersicum	LB	Leaf Mature leaves	3316	1
Solanum lycopersicum	LC	Leaf Mature leaves	5712	16
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	6
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	2
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	7
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	3
Solanum lycopersicum	cLES	leaf 4 weeks	5243	2
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	2
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	5
Solanum lycopersicum	t3_tus	Rearrayed collection of L. esculentum cDNA clones	1883	1
Solanum lycopersicum	vSlycmRNA		8362	2

mRNA member sequences (63)

Alignment image suppressed for unigene with 63 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (5)

Annotations (manual: 1 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	102302	Myo-inositol-1-phosphate synthase GAPDH-like Myo-inositol-1-phosphate synthase - Molecular Function: inositol-3-phosphate synthase activity (GO:0004512) - Biological Process: myo-inositol biosynthesis (GO:0006021) - Biological Process: phospholipid biosynthesis (GO:0008654)	17
2	119333	Myo-inositol-1-phosphate synthase - Molecular Function: inositol-3-phosphate synthase activity (GO:0004512) - Biological Process: myo-inositol biosynthesis (GO:0006021) - Biological Process: phospholipid biosynthesis (GO:0008654) Myo-inositol-1-phosphate synthase GAPDH-like	17
5	129671	Myo-inositol-1-phosphate synthase - Molecular Function: inositol-3-phosphate synthase activity (GO:0004512) - Biological Process: myo-inositol biosynthesis (GO:0006021) - Biological Process: phospholipid biosynthesis (GO:0008654) Myo-inositol-1-phosphate synthase GAPDH-like	17

Preceding Unigenes (1)

Unigene	Build
SGN-U213443	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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