Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U567502 and SGN-U567511 in the current build, Tomato 200607 #2

Unigene SGN-U313555

Unigene Basic Information

Unigene ID:	SGN-U313555
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	313555
mRNA sequence:	Length: 2081 bp

>SGN-U313555 Tomato 200607 #1 (27 members)
TTTTTTTTTTTTTTTTTGGAAGATTCCATCCCTTTAGTTTCTGCACTTCCCATCTCAGCTTTTGCAGCAGCCTTTTCCTTGCTATCTTTC
TTTGTACCAGAGGATGTCCGGCGTTTTTTCTTTGGTGATTCAAGTAGTGAAGGTGGTCTCATTGCCTTGACCTTCTCACTGATCCTTGCT
GATCTCCTTGGAGTCTCACCGGTACTCCAATCAAATTCTGATATACCAGGGCTTCCAGGATGTGCTTTGAGATACTGCTCCAACTGTTTG
CGGTTTTTGATCGGTGGTAACCTCTGTAATGGCTTCTTCTTCGCCATCATCCATGTCTCCTCCGATGATTCGCATGGAACTCCATTCACT
TAATCGAGAGAAGCTCTTCAACTCTCTGCGTAACCACCTCACTTCATGCGCTCGTCCTCTCCAAGGCTTTGTTCTCTTACAGGGTGGCGA
AGAGCAAACTCGACATTGCACCGATCACCTAGAACTGTTCAGACAGGAGAGCTATTTCGCCTACTTGTTTGGAGTGGAAGAGCCTGGATT
TTACGGAACTATTGATATAGCAAGTGGGAAATCTATGCTCTTTATTCCTAGGTTACCCGCTGACTATGCTGTTTGGATGGGAGAAATACA
ACCACCTTCTCACTTCCAGGAAAAGTACAAGGTTACCCAGGTCTTCTATACTGATGAGATTAAGGAAGTTTTGGTTGATCAGTACCAAGC
GACAGGAGCAGCATTACTATTTCTCTTGCATGGGCTTAATACTGATAGCAACAAGTATTTTAAACCAGCAGAATTTCAGGGTATTGAGAA
GTTCCAGACAGATCTAAGCACATTGCATCCTATCCTAACTGAATGCCGTGTTATAAAGTCCGATTTAGAGCTTGCTCTCATTCAATATGC
AAATGACATAAGCTCTGAAGCTCATGTTGAGGTTATGAGGAAAACAAAAGTAGGGATGAAAGAATATCAGTTAGAAAGCATGTTTCTTCA
CCATACCTACATGTATGGCGGCTGTAGGCATTGTTCATACACATGTATATGTGCTACTGGCGATAATAGTGCTGTACTCCATTATGGTCA
TGCAGCAGCTCCAAATGACAAGACATTGCAAGAGGGAGATATGGCACTTCTAGATATGGGAGCTGAGTACCACTTTTATGGGTCCGACAT
AACTTGTTCCTTTCCAGTAAATGGGAAATTTACTCGTGACCAGTCACTTTTATATACTGCTGTTCTTGATGCTCATGATGCTGTCATTTC
TGCCATGAAGCCTGGAGTGAGCTGGGTCGATATGCATAAATTAGCTGAAAGGGTCATTTTGGAATCACTGAAGAAAGGGAACCTACTTGT
TGGGGATGTTGATAAAATGATGGCCGAGCGACTTGGTGCTGTTTTCATGCCTCATGGATTGGGGCACCTTCTTGGAATTGATACTCATGA
TCCTGGGGGTTACTTGAAGGGAGCTAAAAGACCAAAAGAACCTGGATTGAGCTCTCTACGTACGAGCAGAAAGCTCTTAAAGGGAATGGT
GATCACTGTGGAGCCTGGTTGTTACTTCATTGATGCCTTGCTACTTCCTGCCTTGAAGAGTCCAGCAGTTTCAGAGTTTTTCAATCGTGT
TGAGATCAACAGGTTTAGACCTTTTGGTGGAGTCAGAATTGAAAGTGATGTGGTGTGTTTTTTACTGGACTTGTTAGGTGTTATTGGAAA
TAAGTGCTATATCATGTTCATATTAGCTTGGATGTGGTTCCTTTTTAACCTCTATACCTTTGTCAAGTTGTATCCATCTGTTAAATCTTT
CCTTTCTTTTTGTCCTTGAAGTGTGTTACTTCCATTGGATGCATTAACATGAGCAAATGTCCGCGGAAGATTGAAGAGATAGAGGCAGTG
ATGGCGGGGGCTCCTTGGCCGATAGAAAAGACTACCTTTCTATCTGGAAATGGACAAGTGTAATTCTCCCAAATATTGCATGACATCAAG
AAAACTAGAATAATTGGTCCTCTAGCCATCGGTATCTGGGCCTCTCAACAACTAGACATACTTTTCATTGTTTTGAGAGGCAACTCTCTA
CTTGTTCTTGA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (18)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	2
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	1
Solanum lycopersicum	LB	Leaf Mature leaves	3316	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	3
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	1
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	2
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	2
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	4
Solanum lycopersicum	cTSC	seed	2256	1

mRNA member sequences (27)

Alignment image suppressed for unigene with 27 aligned sequences.
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Markers Information (0)

Expression Data (1)

Annotations (manual: 0 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	102056	Peptidase M24 - Biological Process: proteolysis (GO:0006508) - Molecular Function: metalloexopeptidase activity (GO:0008235)	23
2	122603	von Willebrand factor type A Peptidase M24 - Biological Process: proteolysis (GO:0006508) - Molecular Function: metalloexopeptidase activity (GO:0008235) Peptidase M24B X-Pro dipeptidase/aminopeptidase N-terminal - Molecular Function: peptidase activity (GO:0008233)	5
5	132799	von Willebrand factor type A Peptidase M24 - Biological Process: proteolysis (GO:0006508) - Molecular Function: metalloexopeptidase activity (GO:0008235) Peptidase M24B X-Pro dipeptidase/aminopeptidase N-terminal - Molecular Function: peptidase activity (GO:0008233)	5

Preceding Unigenes (1)

Unigene	Build
SGN-U214068	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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