Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U564954 and SGN-U564956 in the current build, Tomato 200607 #2

Unigene SGN-U313975

Unigene Basic Information

Unigene ID:	SGN-U313975
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	313975
mRNA sequence:	Length: 2587 bp

>SGN-U313975 Tomato 200607 #1 (50 members)
TTTTCCTCTAATCCCCAAATTCTCAGTTCTTCTTTCTTTTTAGGGCTAGGAGGGGTTTACTATGGCGTCTTCAACTGCTCAAATTCATGC
TCTTGGAGCTACATATTTCGCTAATTCATCTTCTTCCACTAGAAAACCTTTGAAGTCTGTGTTTTTGGGCCAAAAACTGAACAATAGAAC
CCTAGCTTTTGGATTGAAGCATAAGAAGAGCCGGGGGAATAACGGTGGTTATGCACCGATGCGTGTGGTGGCGGAGAAGGTGGTGGGAAT
TGACTTGGGGACTACTAATTCTGCTGTGGCTGCTATGGAAGGAGGGAAGCCTACCATAGTGACGAATGCTGAAGGACAGAGGACAACTCC
TTCAGTGGTCGCTTATACTAAGAGTGGGGATAGGCTTGTTGGTCAAATTGCTAAGCGTCAGGCTGTGGTGAACCCGGAGAATACCTTCTT
TTCAGTGAAGAGATTCATTGGAAGGAAGATGAATGAGGTGGATGAGGAGTCGAAGCAGGTGTCCTACAATGTCATCAGAGATGAGAATGG
AAATGTCAAGCTTGATTGCCCTGCCATTGGCAAATCATTCGCTGCTGAAGAAATTTCAGCTCAGGTCCTGAGGAAGTTGGTGGATGATGC
ATCCAAATTTTTGAATGACAAGGTTTCCAAGGCTGTTGTCACGGTTCCTGCATACTTCAATGATTCTCAGAGGACAGCAACTAAGGATGC
AGGTCGCATTGCTGGATTAGAAGTTCTTCGGATAATTAATGAACCCACTGCTGCCTCCTTGGCTTATGGTTTTGAAAAGAAAAGTAACGA
AACAATTTTGGTTTTTGATCTTGGAGGTGGTACTTTTGATGTATCAGTTCTTGAGGTTGGTGACGGTGTCTTTGAGGTGTTGTCAACTTC
TGGTGACACCCATCTTGGTGGTGATGATTTTGACAAGAGGATTGTTGATTGGCTTGCTGCAAGTTTCAAAAGAGATGAAGGTATTGATCT
TCTAAAGGACAAACAAGCTCTTCAACGTCTGACTGAGACTGCTGAGAAAGCTAAGATGGAACTGTCATCGCTGACCCAGACTAACATCAG
TTTACCATTCATTACGGCTACTGCTGATGGTCCTAAACACATTGAGACCACTATCACACGTGGGAAATTTGAAGAACTATGCTCAGATCT
GCTTGACAGGCTTAAAACTCCTGTTCAGAATTCCTTGAGAGATGCCAAGCTCTCCTTCAGCGATATTGATGAGGTCATCCTTGTTGGTGG
TTCTACACGTATCCCAGCTGTTCAGGAACTTGTTAAGAAATTGACTGGAAAGGACCCCAATGTTACAGTTAATCCCGATGAAGTCGTTGC
TCTTGGTGCTGCAGTGCAGGCTGGAGTTTTGGCCGGAGATGTCAGCGATATTGTCCTTTTAGATGTCACACCATTGTCCATTGGTTTGGA
AACACTTGGTGGTGTGATGACAAAGATCATTCCAAGAAATACAACATTGCCTACCTCCAAATCAGAAGTGTTCTCTACCGCTGCTGATGG
TCAGACAAGTGTAGAAATTAATGTCCTCCAAGGAGAGCGAGAATTTGTTAGGGACAACAAATCTTTAGGTAGCTTCCGGCTTGATGGAAT
TCCTCCTGCCCCAAGAGGGGTTCCACAAATTGAAGTGAAATTTGACATTGATGCCAATGGTATTCTTTCCGTGACTGCTATTGACAAGGG
TACTGGGAAGAAGCAAGACATCACCATTACAGGTGCCAGCACATTGCCTGGTGATGAGGTCGAGAGAATGGTTAAAGAAGCTGAAAGATT
TGCCCAGGAAGACAAAGAGAAGAGAGACGCCATAGACACAAAGAACCAGGCCGATTCTGTTGTCTACCAGACAGAGAAGCAGTTGAAGGA
ACTTGGAGACAAAGTACCAGGGCCAGTGAAAGAAAAGGTTGAGGCTAAACTTGGAGAGCTTAAAGAAGCAATCTCAGGAGGGTCAACTCA
GACCATGAAGGATGCTATGGCTGCCCTTAACCAAGAAGTAATGCAGCTTGGTCAGTCACTCTACAACCAGCCTGGTGCTGCACCAGGTGC
TGGTCCAGCACCTGGCGGTGCTGATGGACCTTCAGAATCATCATCTGGGAAGGGACCTGATGGAAATGACGTAATTGATGCTGATTTCAC
CGACAGCAAGTGAGCATAGAAGAGCAATTTTGAGGCTATATTTAATTTTCAGCTTTTATACTCTTGCTTAGGTTGTGTATAAGGGATTTA
ACTTTGTGCACAATTACGATTTTGGGGGACAATTTCTGGTGGAATGGGGTACGCTAAAAAGATAATTCATACAGGGGAACTAGAGGTTAG
AAGTGTTGAGGTAGGTGGAGTTATTCTTGATTGCAAAATGAAACAGTGTCTGTCTGTCTACCCATGAATATTTTTAGAAAAATGTTAGTG
GTTCAAACCTTAAGGTTAGAGAAACTGACCTTTCTGGTTCTCTCACCCTACTTTTCCACAATTCTATAGGTAGTCCTTGTGTTCTTGGAT
TACTTGCTGTTATTGGAGTGAATGAATTTGTACTTATTTCTCAGTACCTATTTTATCTTTTCAATCT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (17)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	8
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	4
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	2
Solanum lycopersicum	LB	Leaf Mature leaves	3316	5
Solanum lycopersicum	LC	Leaf Mature leaves	5712	9
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	4
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	2
Solanum lycopersicum	cLER	leaf 4 weeks	5127	2
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	2
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	4
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (50)

Alignment image suppressed for unigene with 50 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 1 | blast: 2 | go: 2 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101444	Heat shock protein Hsp70 - Molecular Function: ATP binding (GO:0005524) Heat shock protein 70	154
2	118449	Heat shock protein Hsp70 - Molecular Function: ATP binding (GO:0005524) Heat shock protein 70	129
5	128965	Heat shock protein Hsp70 - Molecular Function: ATP binding (GO:0005524) Heat shock protein 70	105

Preceding Unigenes (3)

Unigene	Build
SGN-U215199	Lycopersicon Combined #3
SGN-U215200	Lycopersicon Combined #3
SGN-U226644	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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