Sol Genomics Network

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This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U565173 in the current build, Tomato 200607 #2

Unigene SGN-U314991

Unigene Basic Information

Unigene ID:	SGN-U314991
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	314991
mRNA sequence:	Length: 2644 bp

>SGN-U314991 Tomato 200607 #1 (34 members)
TAAATTTATTTATTTAAATCCTCTCCACAAGCTTCTTTTTTCTTCCCCTTCATCTTCATGGGCTGATAAGAGAAAGGTAGTTTTCTACAG
AGTGAAAACTCTCTCTTCTCTTCTCCCATTTTCTTCACACTTTGTATAGAAGAGAAATCTCATTCACCCACAAACCATCTTTACCCAAAT
TCTTCATAACAACCCTAAAGTTTCTTTTTTTTTTTGAAAAACAAATTTACCCATACAATTATTTTGAAATATCCTGAACAATGGACCTTG
CTACAAAGCTCCAGGTAATCGACCTTCGTTCCACTTTTCTCACTGGAAGAACCAATCTTCTTTGCCCTGGGGGTGTGAAAACCACTGCAG
TTACAGTTTTCAATAACCCCAGAAAAAGAAAAGTTCTTAAAATTTCATCGAAATTGCAAGCTGTAGCTGTTGAAACTGCTGAAACTGAGG
TAAAAGAAGATATAGAATCATTGTTTTCGAGTAATTCTAGTGATGAATTTAATTATTCCAGAAGGGGTAATAAACAATCAGGTAATGGGG
CTTCGAGTATTTCATCTGGGGTTAGGCTAAAGAATGTTAGTAAGAGTTATAAAGGTGTTACGGTGCTGAAAGATGTGAGTTGGGAGGTGA
AAAAGGGTGAAAAGGTTGGTTTAGTAGGTGTAAATGGTGCAGGGAAAACGACCCAATTGAGGATTATATCTGGTTTGGAAGAACCAGATT
CTGGGAATTTGATTAAGGCAAAACCTAATATGAAGATTGCATTTTTAAGCCAAGAATTTGAGGTTGAGTCGACAAGAACTGTGAAGGAAG
AGTTTATGAGTGCATTTAAGGAGGAAATGGAAGTTGCTGAGAGACTTGATAAGGTTCAGAAGGCAATTGAGAAATCTGTTGATGATTTAG
AGTTGATGGGGAGGCTGTTGGATGAGTTTGATTTGCTGCAGAGGAGGGCACAAGCTGTGGATTTGGATGTGGTGGACGTTAAGATTAACA
AGATGATGCCCGAGCTAGGATTTGCCCCAGAGGATGCAGATAGACTTGTGGCATCATTTAGTGGTGGCTGGCAAATGCGGATGTCTCTGG
GCAAGATCTTGCTGCAGGACCCAGATTTGTTACTACTGGATGAACCGACCAATCATCTTGACCTTGATACAATTGAGTGGCTTGAGGGTT
ATCTTAATAAGCAAGAAGTTCCGATGGTCATTATATCTCATGACCGAGCTTTCCTTGACCAGTTGTGTACAAAAATTGTGGAGACTGATA
TGGGTGTATCTAGGACATATGATGGAAATTACTCGGATTATATTATTTCAAGGGCTGAATGGATTGAAACACAGAATGCTGCATGGGAAA
AGCAACAGAAGGAAATTGAGCAAACGAGAGATTTGATAAGTAGGTTAAGTGCAGGAGCAAACTCGGGTCGTGCATCTACAGCTGAAAAGA
AGCTGGAAAAACTTCAGGATCAGGAACAAATTGATAAGCCATTCATAAGGAAACAAATGAAGATTAGGTTCCCAGAACGTGAAAGAAGTG
GGAGAACAGTTGTGAATGTTAAAAATCTGGAATTTGCTTTCGAGGATAAGGTTCTTTTCAAGAATGCAAACTTGACAATTGAGAGAGGAG
AAAAAATTGCCATTATTGGTCCTAATGGGTGTGGAAAGAGCACCTTTCTTAAACTGATTATGGGTTTACTGAAGCCAACAAGAGGTGAAG
TTGTGCTTGGGGAGCACAACGTCTTACCAAATTACTTTGAGCAGAATCAGGCTGAAGCACTCAATTTGGAAAAAACTGTCCTTGAAACTG
TAGCAGAAGCTGCTGAGGATTGGAGACTAGATGATATAAAAGGACTCCTTGGACGTTGTAATTTTAAAGCTGACATGCTTGACAGGAAGG
TTTCCTTTTTGAGTGGCGGTGAGAAGGCACGTCTGTCCTTCTGTAAGTTCATGGTGACCCCTTCAACTTTGCTAGTACTGGATGAGCCAA
CCAATCATTTGGACATACCAACGAAAGAGATGCTTGAGGAGGCAATTACGGAGTATCAAGGCACCGTGATAACTGTTTCTCATGATCGGT
ACTTCATAAAACAAATTGTTAACAGAGTATTGGAAGTAAAAGATGGCACTTTACATGATTATGAAGGAGATTATGATTATTACTTGGAGA
AAAACCTTGAGGCCAGGGAAAGAGAGCTTGAACGAGAGGCAGAGATCGAGGATAAGTCTCCAAAAGCCAAAGCCAAATCCAAGATGTCAA
AGGCGGAAAAGGAAGCTCGGAAGAAACAGAAAATGCAGGCATTCCAAGCAGCAAAACAGAAGTCTAAGAAATCAAAGAACTCCAAGAGAT
GGAACTGAAATGGTGTTTTTAGATGCTCCCATTCAGCTCCTTTGCTCTCTCTCTGTACAAAGCTCTAGTGAGCTACATTACCCATCCATC
TTATTATTGTATATAATATAACAAATAGATAAATATAGTAGTACTAGTTGATTATTATTCTTGTCAAACGAGCAGTCTAATTCATAGTCT
CATGATCTATCAGAACACAAGTAATTTATGTTTTGCTTCTTCTCTTCTGGGCCTAAAGTTGATATGACAAACTTGAAAGAGCAATACATA
ATTGTACTGTTTCTTGTTTCTCAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (16)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	2
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	3
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	1
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	1
Solanum lycopersicum	LB	Leaf Mature leaves	3316	2
Solanum lycopersicum	LC	Leaf Mature leaves	5712	8
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	2
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	3
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	3
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	2

mRNA member sequences (34)

Alignment image suppressed for unigene with 34 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 1 | blast: 2 | go: 5 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101386	ABC transporter related - Molecular Function: ATP binding (GO:0005524) - Molecular Function: ATPase activity (GO:0016887)	388
2	118764	ABC transporter related - Molecular Function: ATP binding (GO:0005524) - Molecular Function: ATPase activity (GO:0016887) AAA ATPase - Molecular Function: nucleotide binding (GO:0000166) - Molecular Function: nucleoside-triphosphatase activity (GO:0017111)	31
5	130333	ABC transporter related - Molecular Function: ATP binding (GO:0005524) - Molecular Function: ATPase activity (GO:0016887) AAA ATPase - Molecular Function: nucleotide binding (GO:0000166) - Molecular Function: nucleoside-triphosphatase activity (GO:0017111)	11

Preceding Unigenes (2)

Unigene	Build
SGN-U217051	Lycopersicon Combined #3
SGN-U226772	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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