Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U569454 in the current build, Tomato 200607 #2

Unigene SGN-U317081

Unigene Basic Information

Unigene ID:	SGN-U317081
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	317081
mRNA sequence:	Length: 1191 bp

>SGN-U317081 Tomato 200607 #1 (12 members)
TTTGTGAAATTATGGGTCGTTCTGTTTGGGCACCGCAGATTTTCAATTGTGGAGCGCCTGATACAGGAAATATGGAGGTATTACTCCGGT
ATGGGAACAGGGAACAGATAAAGGAATGGCTTGTCCCCTTGCTTGAGGGAAAGACACGGTCTGGCTTTGCAATGACAGAGCCACAAGTTG
CTTCCTCAGATGCTACTAATATAGAATGTTCCATCAAAAGACATGGAGACTCTTATATCATCAATGGGAAGAAGTGGTGGACCAGTGGAG
CCATGGATCCGAGGTGCAAACTTCTCATTGTGATGGGAAAAACTGACTTAACTGCTCCTAAGCATAAACAACAATCCATGATCTTGGTAG
ACATTAATACTCCAGGTATTACGATAAAGAGACCACTGACAGTATTTGGTTTTGACGATGCACCTCATGGGCATGCGGAAATATTTTTTG
AGAATGTATCCGTCCCTGCGAACAATATTCTACTCGGTGAGGGGCGTGGCTTTGAGATTGCCCAGGGTAGGCTAGGTCCTGGAAGGTTGC
ATCATTGCATGAGGCTAATAGGTGCAGCCGAACGCGGCATGCAGATGATGGTTCAACGGGCTCTTGAAAGACGAGCTTTTGGAAAATTAA
TTGCCAAACACGGTGCATTCCTTTCGGATGTTGCCAAATGTCGAATTGAACTAGAGAAAACCAGATTACTGGTTCTGGAAGCTGCTGATC
AGCTTGACCGCCTCGGAAACAAAAAGGCTCGTGCTACAATCGCGATGGCAAAGGTCGCTGCACCAAACATGGCATTGATGGTTCTCGATA
CTGCAATGCAAGTGCACGGTGCTGCTGGTGTATCCGGCGATACTGTTCTTGCTCATCTCTGGGCTACTGCTAGGACATTGAGAATTGCAG
ATGGTCCTGATGAAGTACACTTGGGAACAATCGCGAAAACTGAGCTAAGGAAATCCCGGCTTTGAAAACCTTATATAGTATAACTATCGC
GAAATACAATATAAAATAAAAATCGAAAAAAGTGCTGCATGAAAAAAAAAATACAAGGCTGTATATACCACAGTCTTGTAAAATATAGAA
ATCTAAATACTGATAGTGAAAATTGTTTCAACAATTTCACAACTGTCAATGAATGTTTGTGGAGTGGCTTGTTAATGCATTGCTATATCC
ATATTACTTTTTAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	4
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	5
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1

mRNA member sequences (12)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (4)

Annotations (manual: 1 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101614	Acyl-CoA dehydrogenase central region - Molecular Function: acyl-CoA dehydrogenase activity (GO:0003995) - Biological Process: electron transport (GO:0006118) Acyl-CoA dehydrogenase type1/2 C-terminal - Molecular Function: acyl-CoA dehydrogenase activity (GO:0003995) - Biological Process: electron transport (GO:0006118) Acyl-CoA dehydrogenase middle and N-terminal Acyl-CoA dehydrogenase C-terminal-like	58
2	119600	Protein kinase-like Acyl-CoA dehydrogenase C-terminal-like Acyl-CoA dehydrogenase middle and N-terminal Acyl-CoA dehydrogenase central region - Molecular Function: acyl-CoA dehydrogenase activity (GO:0003995) - Biological Process: electron transport (GO:0006118) Acyl-CoA dehydrogenase type1/2 C-terminal - Molecular Function: acyl-CoA dehydrogenase activity (GO:0003995) - Biological Process: electron transport (GO:0006118) Aminoglycoside phosphotransferase Acyl-CoA dehydrogenase type 1 - Molecular Function: acyl-CoA dehydrogenase activity (GO:0003995) - Biological Process: electron transport (GO:0006118)	14
5	130993	Protein kinase-like Acyl-CoA dehydrogenase C-terminal-like Acyl-CoA dehydrogenase middle and N-terminal Acyl-CoA dehydrogenase central region - Molecular Function: acyl-CoA dehydrogenase activity (GO:0003995) - Biological Process: electron transport (GO:0006118) Acyl-CoA dehydrogenase type1/2 C-terminal - Molecular Function: acyl-CoA dehydrogenase activity (GO:0003995) - Biological Process: electron transport (GO:0006118) Aminoglycoside phosphotransferase Acyl-CoA dehydrogenase type 1 - Molecular Function: acyl-CoA dehydrogenase activity (GO:0003995) - Biological Process: electron transport (GO:0006118)	8

Preceding Unigenes (1)

Unigene	Build
SGN-U215859	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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