Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U576973 and SGN-U576975 in the current build, Tomato 200607 #2

Unigene SGN-U319139

Unigene Basic Information

Unigene ID:	SGN-U319139
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	319139
mRNA sequence:	Length: 1614 bp

>SGN-U319139 Tomato 200607 #1 (12 members)
GCGATTGGCGGCCAATCGGCCGAATTACAGGAAATTATTGAATTCTTTCCACTGTCGATTTCTTGGTTTAATTTTCTGTTCATACAAATA
TATGGATACTGAATCAGTGATTGAGTTCTTGGGTGATGTGCCATTGTTGCAGAGGCTACCTAGTTCTTCCCTCAAGAAAATTGCCCAACT
CGTCAAGGTTAAACATTATGATCGTGGAGATTATGTTATCCGCGAAGGAGAAGCTGTGGATGGAATTTACTTTATATGGGATGGAGAGGC
AGAAGTATGCGGTTTCTGCCAAGCTGATGATGAAAATCGTCCTGAATTCCAGCTGAAAAAATTTGATTATTTTGGTCATGGTTTGGCGAC
ATCTAGACAGACTGCCGAGGTGATCGCATTGTCTAAGCTGACCTGCTTAGTGTTGCCTCATGAGCATAATAATCTGCTCCAGCCCAAATC
AATTTGGAACGCAGATCAAGAAAGAGATCTGTGTCCACTTGTGGAGCACATATTGCTCTTGGAGCCTATTGAGGTGAACATTTTCCAAGG
TATAACATTGCCAGATGCCCCTGTAAATAATAATGTATTTGGAGGTCAGTTTATTGGGCAGGCATTGGCTGCAGCATCAAAAACTGTCGA
TTTTCTCAAAATTGTTCATAGTTTGCATGCTTACTTCCTTCTTATTGGAGATTCTGACATTCCAATCATATATCAAGTTTACCGTGTACG
TGATGGAAAGAGCTTTGCTACACGAAGGGTGGATGCAATTCAGAAAGGGAATATTGTATTCACATTGGTAGCTTCATTTCAGAAAGATGA
AGATGGATTTGATCACCAGGAAGCAAAAATGCCTAATGTGCCTGATCCAGAAACGCTTTTATCACTGGAAGATTTGAGAGAAATGCGCAA
GACTGATCCTCGGCTTCCCAGGACATACCGAAATAAGGTTGCTACTGCAAATTTTGTACCTTGGCCAATAGAAATAAGGTTTTGTGAACC
TAATAATGCCACTAGTCACACCAAGTCTCCTCCAAGTTTGAGATATTGGTTCAGAGCAAAAGGAAAACTTTCGGATGACCAGGCTTTACA
TAGATGTGTTGCAGCATATGCATCAGATCTAATCTTTAATACTGTCAGTCTGAATCCTCATCGAAGGAAGGGTTTCAAGATAGCTAAAGT
TAGTCTGGATCATTCGATTTGGTTCCACAGATCTTTGAGAGCTGATGATTGGATATTGTTTGTGATGCACAGTCCGACTGCTTATAATGC
ACGTGGCTTTGTGACGGGCCAAATGTTTAATAGGAAGGGAGAGCTTGTAGTGTCATTGACTCAAGAGGCCTTATTGAGGCCAGCCAGAAA
ACAACCTGTATTCCAACCAAAGCTCTAATCCATGTCAGGTCCATTGGAAAAAGAGGACTAGGTAAAACTGCAGAAAAGCTCAAATAAGTC
CTGTAGAGGTCGCGATATACAATTAACATAGCTGTTTTAATAGTGGAAGAGTATGATGTATCTATATTTTACAACCATTATACAGAACTA
CCCCACCATTCTCTCTGTAACTCTCATCTCACCTTTATATATCCCCCCACCAGAAGAGGCATTGCTAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (9)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	3
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1

mRNA member sequences (12)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (2)

Annotations (manual: 1 | blast: 2 | go: 3 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	102732	Cyclic nucleotide-binding Acyl-CoA thioesterase - Biological Process: acyl-CoA metabolism (GO:0006637) - Molecular Function: acyl-CoA thioesterase activity (GO:0016291)	10
2	120061	Cyclic nucleotide-binding Acyl-CoA thioesterase - Biological Process: acyl-CoA metabolism (GO:0006637) - Molecular Function: acyl-CoA thioesterase activity (GO:0016291)	10
5	130349	Cyclic nucleotide-binding Acyl-CoA thioesterase - Biological Process: acyl-CoA metabolism (GO:0006637) - Molecular Function: acyl-CoA thioesterase activity (GO:0016291)	10

Preceding Unigenes (2)

Unigene	Build
SGN-U220092	Lycopersicon Combined #3
SGN-U225126	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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