Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U576004 in the current build, Tomato 200607 #2

Unigene SGN-U319382

Unigene Basic Information

Unigene ID:	SGN-U319382
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	319382
mRNA sequence:	Length: 1341 bp

>SGN-U319382 Tomato 200607 #1 (11 members)
GACTCTTAAACCCTAGATTTTCATCACTCCAAAAACCTTCTTCCTCGTCAGCTCAAAGCTCAGCCAAGCAATGGCAAATCGGCGATGCCT
TCAAACCCTAACCCGTCATTTATCATACCTTCTCTCTCCAAACCCGTCTCTTTGTTCCCCTCAAACCCTAACCCCACCACTGCTCAATTC
CATCAACACACTAACTTCGTCTCCCAAATGCCCCCAAGTTACCACTCAACTTTCATCTTTCCACCGGCATTTCTCTTCGAATCGACCGAG
CAATAGCGACGAGGAGGAAGAGGATGAAAGTGAAGATGAAACAGATTATGATGATGACGATGATGATGACGTTGAGGGCTTCAAATCGAA
TAGTGAGCCCGGTAGAGTATACACTCCGGAGGAGAAAGAGTACGAGGCGGCAGAAATTGGATATAAGGTGATCGGCCCACTTCAGAAATC
GGACCGGGTTTTCAAACCATATGAACCCGTTTATGCTGTTATTCAGATTGGTTCCCACCAGTTTAAAGTGAGCAATGGCGATTCCATTTT
TGTGGAGAAACTGAAGTTCTGTGAAGTCAATGACAAGTTGATTCTAAACAAGGTTCTGCTGCTGGGCTCAAAGACACAGACAATCATTGG
CAGGCCTGTATTGCCTGATGCAGCTGTTCATGCTGTTGTTGAGGAGCATGCATTAGATGCTAAAGTACTGATATTCAAGAAGAAGAGACG
AAAGAATTATCGACGAACACGAGGGCATCGACAGGAATTAACAAAGTTGAGGATTACGGATATTCAAGGAGTTGAAAAGCCTGAAGTGGT
ACCAATTCTCAAGACAGAGAAGAAAGATGCTAAGAAGGTAGCAGTAGCAGCTTAAAAATGGTGAGATGGTTAAAGAAATCTGCTTGAGTA
GGGGATTTTTGTCATATACAGCAGACACAGTCGGCATTTTCCATTCTCTTTTTCTCTTATAAATTTTGTGTTAGAACTCAGATGCCACAT
GAGGTCAGATGGAAGGGAATGAATTTGTTGTAGGCTTTAACATAGTCAAATCTTGAGGATGTGTATTTGGTTATGAGAGCATATAGCTCA
TCAAAGCTAAAGAAAATAATATTTCTTGCAAAGGCGTATTTCAAGAGCAGTGTAAACTTTTTTTCATTTATGTTTTGGTATGTCCTTTCC
TTGTGTTACTGTCGGACAGTAAATACCTACTGCACCGAATATTTACACAAAACCATGTTTTCTTTGGTTTTTGCCTTGTATCAGGTTACA
CTGAATCTTTGGTTTTTGCATTGACTTGTATAAAGCATTAGCATTGTTTGGTTCCAAAAAAAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	5
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (11)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (2)

Annotations (manual: 0 | blast: 2 | go: 5 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	102663	Ribosomal protein L21 - Molecular Function: RNA binding (GO:0003723) - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412)	11
2	123688	Ribosomal protein L21 - Molecular Function: RNA binding (GO:0003723) - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412)	4
5	133856	Ribosomal protein L21 - Molecular Function: RNA binding (GO:0003723) - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412)	4

Preceding Unigenes (1)

Unigene	Build
SGN-U217708	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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