Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U567340 in the current build, Tomato 200607 #2

Unigene SGN-U321337

Unigene Basic Information

Unigene ID:	SGN-U321337
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	321337
mRNA sequence:	Length: 2142 bp

>SGN-U321337 Tomato 200607 #1 (9 members)
AGAGAGAGAGACTAGTCTGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATCATGAATTTGTGTTTCAAGACGCCAAAAC
GCCCAAAAATAAAAGTTACGTCAGTCATGATAAAGCATACTATCTATTTCAACAACACACTTGATGCATCTCAAGGAGAAGATGCAACAT
ATAATACATAAATAGTAATGTACCCAAAAAGGCGAATGAATGCAGTTGATATTCATTCCCACTGTCCCCCATCCACAAGGATCACAAAAA
GAAAGACAACTCAGGTGAAGGGATAAAAGAAAACATCCTTTCACCAAAACATTCAAACAGAGATGGCAACAACCGTACGGCATCCAGATC
TTCCTTCCAGGCCTGATCAAGAGGAACCGATGTTTTTTGACCTTGACCAGTAGTCATATCCCTTCTACCAATGGTCCTCAGCATATTCTC
GTTTTGCTGCAAACCATGTGATGCTGAAGATACACCAGTTTCTGTAACCCTAGGGGTTACAGCATATCCAACAGCTGGTCCTTGTGTGCT
TACTGGCAGAGAATTTGCCGTCATTGAACTAATTGGACCATCTGTCATTAATCTCTTGGGTGGAGGCTGGGTCATCATGTTGTTCAAGCT
TGCTTTCCGTTTGCCCGACGACAATGTAGTTGAGACTTTCCATTTACTCTTCAAGAATGTGCGAGTAGATGGAGATAGTGAAGCTGGAAG
CAACTTGAAGCGCTCGTAGATGCATAAACCAGCAGCACACATCAAGGCTCCATATACACGCCAAGCTTCAAACCTCTTCATTTCATTTTT
TTGCTTCTCGGGCTGCATTTCGGGTTCTAGTAATTGCAAATAAGCCTCAAGATTTGGCAGCACAAGTAGGCGAACCACCCCAGGTCCAAG
AGCTGCGAGCCCTTGAATTGCTCCATAATGTTGTGGCAGCGCTTTAGTTGGATCCAGAAAAGCATGCAGCAAAGTACTGGTGACACGTGA
CTGGAGATTGTGGTACACACGACCATATCTCTTGCATATTAAAGCAATCAATGTAGCTGAGAAGTCCCTAAGTTCCCAATGATTGTCAGA
TAATCTGTTTCCCAACCTTCTTGCAACAAGGCATGTCATTATAGAAGGCATCAACTGGTGCAGATATGGTTCAATATGTACTTGCTTATT
CTGGAGAAGGCTCCAGAGTAGTCGCATCAAAGCGAAAAGGAGAGGAAAATTGTTCAAATTCCGAGAAACCTCATCAGATACAAAATATGT
AAAGTAAGGTACTACTGGATGAATCCCTGAGTCTGTTGCTAAGCTTTGTAGAGCTTCTTTAAAGAGAAAGGGATTAGATCTATTCACTGT
AAGCTCTTTAATTTTTTCATAATAGAGCTGAAGCTCACGCGATAGGACATGCTTAACAGGTACTTTAATATCAACAGGAACTCCATCCTC
CTTATACTCGGTATTTCTATTATCAGACGGCATAGCTAAGACTTCAGGCAGAGGGTTTTCAGGAATAGCAGGTTGTACTCCTTCTATAGC
TAACCAATGGGCAACAACAGCAGCATCTAGTGGTGCTTTCGGCAAAGGAGCTTCGATCACATCTTTGAATTCTACATCCTTCTCTTCAAT
ATAGAACAAATCCTTATGTCCAGCTGCTCTCCTGAACCTTAACGGATCTCCTGAAGCAAAGCCATATATTGGCTCTACACCTCTCAAGCT
AAGTGCAGCATCCACATCATCAGTAGATAACGTAGTTCTCTTCGAATGATGCATACATTTAATAGCTTCCTGCATAATCTCTCGAATACG
GTATTCGACATCGACGGCCAGAGCAGGCAAGACATCTGGTGATAAATTGCTTACACCTATACTTTGTGATATCACTTCTATTGTCTCTTT
CGGTACTATACTCATCTTTCTACTAGCTCCGGTTACTCTAGGTTAAATCCAGCTGCGAACCCAGAAATTCGTCTATCTCGGTCAGTTTTT
CAGGCGAAGATTACTTCTAGCACAGCTACGTATGAGGAACTCTGAAGCGGTGAACGGCGGCGGAGCGGCGATGGAATGGAGAGATTAAAA
CCTAAGCGGAGGGTAGAGAGAGAAAATTGTATGAAAGCGTAAAAGCTACAATGCGCAGTCTCGCCGAGGACC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLER	leaf 4 weeks	5127	3
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum lycopersicum	cTOS	suspension cultures	8026	1
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (9)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (2)

Annotations (manual: 2 | blast: 2 | go: 8 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	103709	Protein of unknown function DUF1546 - Molecular Function: RNA polymerase II transcription factor activity (GO:0003702) - Cellular Component: nucleus (GO:0005634) - Molecular Function: transcription initiation factor activity (GO:0016986) - Biological Process: regulation of transcription factor activity (GO:0051090) Armadillo-like helical - Molecular Function: binding (GO:0005488)	5
2	122016	Armadillo-like helical - Molecular Function: binding (GO:0005488) Protein of unknown function DUF1546 - Molecular Function: RNA polymerase II transcription factor activity (GO:0003702) - Cellular Component: nucleus (GO:0005634) - Molecular Function: transcription initiation factor activity (GO:0016986) - Biological Process: regulation of transcription factor activity (GO:0051090)	5
5	132228	Armadillo-like helical - Molecular Function: binding (GO:0005488) Protein of unknown function DUF1546 - Molecular Function: RNA polymerase II transcription factor activity (GO:0003702) - Cellular Component: nucleus (GO:0005634) - Molecular Function: transcription initiation factor activity (GO:0016986) - Biological Process: regulation of transcription factor activity (GO:0051090)	5

Preceding Unigenes (2)

Unigene	Build
SGN-U222472	Lycopersicon Combined #3
SGN-U226712	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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