Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U576389 in the current build, Tomato 200607 #2

Unigene SGN-U322215

Unigene Basic Information

Unigene ID:	SGN-U322215
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	322215
mRNA sequence:	Length: 2186 bp

>SGN-U322215 Tomato 200607 #1 (8 members)
TGGATCCACAAAAAAATCGCTTTAATCATGAGTTTATGCTTCTGCTCCAATTTGAAACCATCAATTCTCTTCCCGGAGTCCGATTTCCGA
TGGATTCAGACCCGTACCCGACCCGTTTCCTTCACTAAGCTAATCCAAACAAAGTACAGTCACCGTGGATGCATTAAAGCCGTCGGAGAA
GAAATCGGAGTTCTATCGCCGGACGACAGCTTATCGGAGCGAAATCCGGTAATTGAAGAGGAATCTGTACCGGAAACCGAGGTGAATGAA
GTAGAAAATGGAGTTGCTAGTGTTGTAGCTGAAGAAAAAGCTCAAACTTGGATAAGTAAGAGTGAGAACAAGGAAAAATTGGATGAGGAA
GATGAAAATTCTAGTAGATTCAAGCTACGTAATGGTAAAGAGGTTTTTGAAGAGAAAGCCTACCTAGTGGGTGTTGCGTGCAAAGGTGAT
ACAGAAGATTCATTTGGTATAGAGGAATCACTCAAGGAATTGGCTCAGCTGGCTGATACTGCCGGACTACTGGTTGTTGATTCTACATAT
CAGAAGCTATCTTCTCCCAATCCGAGGACTTACATAGGATCTGGAAAGGTTTCAGAAATCAAAAGCGCAATTCGTGCATTTGATGTTGAG
ACTGTTATATTTGATGATGAACTTTCACCCGGACAATTGCGTAATTTGGAGAAGGCTTTTGGTGGAGATGTTAGAGTGTGTGATCGCACT
GCTCTCATACTGGATATTTTCAACCAGCGTGCAGCAACCCGTGAAGCATCTTTACAGGTGTCATTGGCACAAATGGAATACCAATTACCA
CGGTTAACCCGTATGTGGACTCACCTTGAGCGTCAAGCTGGAGGGCAGGTCAAGGGTATGGGTGAAAAACAGATCGAAGTAGACAAGAGA
ATTTTACGTACTCAAATTGGTGTACTAAAAAAAGAGCTAGAATCTGTTCGGAAGCATCGTAAACAATACAGGAACCGTCGTGTCTCTGTA
CCTGTCCCTGTTGTATCTTTGGTTGGATACACAAATGCCGGAAAAAGTACACTTCTTAACCAGTTGACTGGGGCTGATGTTCTTGCCGAG
GATCAATTATTCGCTACACTTGATCCTACTACAAGAAGGGTGCAGATGAAGAATGGGAAGGAGTTCCTGCTTACAGATACTGTTGGCTTC
ATCCAAAAATTACCGACAACTCTGGTTGCAGCCTTTAGGGCAACACTTGAAGAAATCGCTGAGTCTTCAATTTTAGTGCATGTTGTGGAC
ATCAGTCACCCACTAGCAGAGCAACAAATAGAGGCTGTTGAGAAAGTTCTTTCAGAACTGGATACATCATCAATACCAAAGTTGATGTTG
TGGAACAAGGTTGATAAAGCTGAAGATCCAGAGAAAATCAAGTTAGAAGCCAAGATGAGAAACGATGTGGTTTGCGTCTCTGCTTTAACT
GGTGAAGGGTTGGATGAATTCTGCAACGAAACCCAAATAGACTAAAGGATGCAATGGTATGGGTGGAAGCCTTGATCCCTTTTGATAAAG
GGGAACTCCTCAGTACGATACATCAAGTCGGAATGGTTGAGAGAACTGAATACTCTGAGAAAGGAACTCTTGTGAGAGCACATGTTCCCC
TCCGATTTGCAAGGCTTCTAACTCCTATGAGGCAAATGTGTGTATCATAATTGCTTCAAGTCACCAAAATACATATACTTGAAGTGCAAC
AACACAAGCACATCATGATTACGGCGAACATAAATTGTAACTCAAGTAGATGATGAATGTGAAACTCCCAACACAAGAATCTCCAGATTG
TGGCTTCTGACGAACATGCATAATTATAGTAAACAAGAATTACTAGAAGTCATCCATCTCCTCACATCAGCAATCCGTTGCTGAAGAAAA
AGCCGGTATGCTTGTTCAAAGGAATTTGTGCTCGATTGGTTTACATTATTCGTACTTCTGTACTCACCAACTGCTGCTTCTGTACATAGA
AATATCTCGTCACACGTAACTACTTTGTTACACTGTTCCTTCTCCCCATTGTACAAATTGACCTAATATTCCTAAACAGTTGATCGCGTG
ACATGCGCAGTTTGACCTGGCTTGTCTATGTGAGCTGTAGAGAATGTTCTGTTTTATCAGCAAGATGATTTTCTTTGTAGTTGTAGCTTT
CTTCTGTGTTTAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	LC	Leaf Mature leaves	5712	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	3
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (8)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 3 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101764	GTP-binding protein HSR1-related - Molecular Function: GTP binding (GO:0005525) - Cellular Component: intracellular (GO:0005622) GTP1/OBG - Molecular Function: GTP binding (GO:0005525)	39
2	121927	GTP1/OBG - Molecular Function: GTP binding (GO:0005525) Small GTP-binding protein domain - Molecular Function: GTP binding (GO:0005525) GTP-binding protein HSR1-related - Molecular Function: GTP binding (GO:0005525) - Cellular Component: intracellular (GO:0005622)	6
5	132944	GTP1/OBG - Molecular Function: GTP binding (GO:0005525) Small GTP-binding protein domain - Molecular Function: GTP binding (GO:0005525) GTP-binding protein HSR1-related - Molecular Function: GTP binding (GO:0005525) - Cellular Component: intracellular (GO:0005622)	5

Preceding Unigenes (2)

Unigene	Build
SGN-U223183	Lycopersicon Combined #3
SGN-U236666	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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